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Citing CMDGA
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Annotation type
1
caQTL
1
target gene predictions
Annotation Category
1
Genetic variant effects
1
Target gene links
Annotation type Category
1
ATAC-seq
1
HiC
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
2
cardiomyocytes (cardiac muscle cell)
2
liver
2
psoas muscle
1
EndoC_BH1
1
aorta
1
cardiac precursors (cardiac muscle cell)
1
endothelial cell
1
endothelial cell of umbilical vein
1
heart
1
heart left ventricle
1
heart right ventricle
1
lymphocyte of B lineage (iPSC)
1
mesenchymal stem cell
1
pancreas
1
smooth muscle cell
1
type I muscle cell
1
type II muscle cell
Organ
2
liver
Life stage
1
adult
Date released
1
March, 2020
1
May, 2022
Software used
26
r
15
chromhmm
12
macs
10
encode-ccres
2
abc
1
bimbam
1
deseq2
1
eigenmt
1
emmax
1
haploview
1
hiccups
1
mach2qtl
1
nospecificsoft_customcode
1
qTLtools
1
rasqual
1
snap
1
unknown
Lab
1
AMP-T2D consortium
1
Karen Mohlke, UNC
Project
2
AMP
RFA
2
AMP
biosample_term_name!
Rhabdomyosarcoma
Showing 2 of 2 results
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Download
FileSet
DSR797VBE
released
Annotation file set
: caQTL annotation of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab:
Karen Mohlke, UNC
Project:
AMP
FileSet
DSR940SFE
released
Annotation file set
: A target gene prediction annotation in liver of DSR477FKL Hi-C
Lab:
AMP-T2D consortium
Project:
AMP