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Schema
Citing CMDGA
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Annotation type
5
chromatin state
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
Available data
bed bed3+
5
bed bed9
File set status
5
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
28
islet of Langerhans
24
heart
21
brain
21
monocyte
21
stomach
18
A549
18
lung
17
liver
16
adrenal gland
16
epithelial cell of proximal tubule
16
kidney
16
muscle of arm
16
small intestine
15
glomerular endothelial cell
15
muscle of leg
15
placenta
13
common myeloid progenitor, CD34-positive
13
large intestine
13
left lung
13
muscle of back
12
neural progenitor cell
12
regulatory T cell
11
T-helper 1 cell
11
cardiomyocytes
11
hematopoietic multipotent progenitor cell
11
right kidney
11
right lung
11
thymus
11
tibial nerve
10
B cell
10
T-helper 17 cell
10
body of pancreas
10
caudate nucleus
10
heart left ventricle
10
hepatocyte
9
CD4-positive, alpha-beta memory T cell
9
EndoC_BH1
9
H1-hESC
9
cerebellum
9
coronary artery
9
extended pluripotent stem (EPS) cells
9
frontal cortex
9
induced pluripotent stem cell
9
left kidney
9
progenitor cell of endocrine pancreas
9
putamen
9
renal cortex interstitium
9
renal pelvis
9
right atrium auricular region
9
substantia nigra
9
tibial artery
8
ascending aorta
8
macrophage
8
spinal cord
8
spleen
7
CD8-positive, alpha-beta memory T cell
7
T-helper 2 cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
mature neutrophil
6
Ammon's horn
6
K562
6
T cell
6
amygdala
6
anterior cingulate cortex
6
embryonic stem cell
6
endothelial cell
6
glomerular visceral epithelial cell
6
heart right ventricle
6
hypothalamus
6
kidney interstitial cell
6
lymphoblastoid cell line
6
mononuclear cell
6
neutrophil
6
nucleus accumbens
6
ovary
6
right lobe of liver
6
skeletal muscle tissue
5
C1 segment of cervical spinal cord
5
CD14-positive, CD16-negative classical monocyte
5
MCF-7
5
aorta
5
cerebellum (Hemisphere)
5
endothelial cell of umbilical vein
5
gastrocnemius medialis(Muscle - Skeletal)
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
left ventricle myocardium
5
naive thymus-derived CD4-positive, alpha-beta T cell
5
natural killer cell
5
pancreatic ductal cell
5
retina
5
sigmoid colon
5
temporal lobe
5
testis
5
thyroid gland
5
transverse colon
5
trophoblast cell
4
CD14-positive monocyte
4
alternatively activated macrophage
4
angular gyrus
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
chorionic villus
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endocrine pancreas
4
foreskin keratinocyte
4
gamma-delta T cell
4
gastrocnemius medialis
4
layer of hippocampus
4
muscle of trunk
4
naive thymus-derived CD8-positive, alpha-beta T cell
4
nephron progenitor
4
psoas muscle
4
right cardiac atrium
4
skeletal muscle myoblast
4
skin of body
4
vagina
3
CD4-positive, alpha-beta T cell
3
CD8-positive, alpha-beta T cell
3
HeLa-S3
3
Peyer's patch
3
S-shaped body
3
T follicular helper cell
3
blood cell
3
central memory CD8-positive, alpha-beta T cell
3
chorion membrane
3
effector memory CD8-positive, alpha-beta T cell
3
endometrium adenocarcinoma
3
esophagus
3
esophagus muscularis mucosa
3
hepatocyte(AFP)
3
immortal human breast epithelial cell line cell
3
inflammatory macrophage
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney connecting tubule epithelial cell
3
kidney cortex collecting duct intercalated cell
3
kidney distal convoluted tubule epithelial cell
3
kidney glomerular epithelial cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
kidney tubule cell
3
left renal cortex interstitium
3
mammary gland epithelial cell
3
memory B cell
3
naive B cel
3
naive T cell
3
neurosphere
3
pancreas
3
prostate gland
3
right renal cortex interstitium
3
skeletal muscle satellite cell
3
thoracic aorta
3
upper lobe of left lung
3
uterus
2
22Rv1
2
Brodmann (1909) area 46
2
KARPAS-422 cell
2
Kupffer cell
2
LNCaP clone FGC
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
T47D
2
adipose-derived stem cell
2
astrocyte
2
blood
2
breast epithelium
2
bronchial epithelial cell
2
cingulate gyrus
2
colonic mucosa
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
differentiating adipose-derived stem cell
2
dorsolateral prefrontal cortex
2
duodenal mucosa
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
endodermal cell
2
epithelial cell of prostate
2
erythroblast
2
esophagus squamous epithelium
2
eye
2
fibroblast of breast
2
germinal matrix
2
globus pallidus
2
iPSC derived cell line
2
keratinocyte
2
kidney capillary endothelial cell
2
kidney epithelial cell
2
kidney inner medulla collecting duct intercalated cell
2
left cardiac atrium
2
left renal pelvis
2
limb
2
lower leg skin
2
mature natural killer cell
2
medulla oblongata
2
memory T cell
2
memory regulatory T cell
Disease term
5
breast cancer
Organ
5
mammary gland
Life stage
5
adult
Date released
5
September, 2022
Software used
5
chromhmm
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
files.file_type!
bed bed3+
organ_slims!
connective tissue
Showing 5 of 5 results
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Download
FileSet
DSR097QMG
released
Annotation file set
: Chromatin states for BSS01244 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR983KRN
released
Annotation file set
: Chromatin states for BSS01243 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR213OTC
released
Annotation file set
: Chromatin states for BSS01240 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR128LSP
released
Annotation file set
: Chromatin states for BSS01235 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR624TOZ
released
Annotation file set
: Chromatin states for BSS01226 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP