Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
binding sites
1
target gene predictions
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
1
ATAC-seq
1
ChIP-seq
1
DNase-seq
1
H3K27ac ChIP-Seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
79
heart
66
muscle of arm
65
brain
61
lung
59
kidney
59
stomach
56
muscle of leg
55
placenta
54
large intestine
54
muscle of back
53
HeLa-S3
53
small intestine
52
left lung
51
H1-hESC
45
thymus
44
right lung
42
right kidney
39
renal cortex interstitium
38
renal pelvis
36
left kidney
35
adrenal gland
30
spinal cord
23
CD4-positive, alpha-beta memory T cell
21
islet of Langerhans
21
neural progenitor cell
21
trophoblast cell
19
CD14-positive monocyte
19
HFFc6
19
K562
19
foreskin keratinocyte
18
endothelial cell of umbilical vein
17
induced pluripotent stem cell
17
liver
17
muscle of trunk
16
H9
16
T-helper 17 cell
16
chorionic villus
16
heart left ventricle
16
smooth muscle cell
15
endothelial cell
14
B cell
14
adipocyte
14
common myeloid progenitor, CD34-positive
14
foreskin fibroblast
13
EndoC_BH1
13
heart right ventricle
13
neurosphere
13
pericyte cell
13
retina
12
cardiac muscle cell
12
keratinocyte
12
left renal cortex interstitium
12
pancreatic ductal cell
11
CD8-positive, alpha-beta T cell
11
cardiomyocytes
11
fibroblast
11
fibroblast of lung
11
hepatocyte
11
left cardiac atrium
11
left renal pelvis
11
right renal cortex interstitium
11
right renal pelvis
10
SK-N-SH
10
pituitary stalk
10
spleen
9
HepG2
9
T-helper 1 cell
9
T-helper 2 cell
9
chorion membrane
9
epithelial cell of prostate
9
extended pluripotent stem (EPS) cells
9
lymphocyte
9
macrophage
9
mesenchymal stem cell
9
neutrophil
9
pancreatic acinar cell
9
progenitor cell of endocrine pancreas
9
regulatory T cell
9
skeletal muscle myoblast
9
trophoblast
8
22Rv1
8
GM12878
8
SK-N-DZ
8
astrocyte
8
bronchial epithelial cell
8
endodermal cell
8
eye
8
fibroblast of dermis
8
pancreatic delta cell
8
tongue
7
CD8-positive, alpha-beta memory T cell
7
WI38
7
embryonic stem cell
7
fibroblast of cardiac tissue
7
limb
7
memory B cell
7
monocyte
7
naive thymus-derived CD8-positive, alpha-beta T cell
7
osteoblast
7
pancreatic alpha cell
7
pancreatic beta cell
7
psoas muscle
7
skin fibroblast
6
CD4-positive, alpha-beta T cell
6
HEK293
6
IMR-90
6
NAMALWA cell
6
T cell
6
cardiac precursors (cardiac muscle cell)
6
cardiomyocytes (cardiac muscle cell)
6
choroid plexus epithelial cell
6
colon epithelial cell
6
dendritic cell
6
dermis lymphatic vessel endothelial cell
6
epithelial cell of esophagus
6
epithelial cell of proximal tubule
6
erythroblast
6
foreskin melanocyte
6
glomerular endothelial cell
6
glomerular visceral epithelial cell
6
kidney epithelial cell
6
mesendoderm
6
mesodermal cell
6
naive thymus-derived CD4-positive, alpha-beta T cell
6
neural cell
6
olfactory receptor cell
6
ovary
6
pancreatic stellate cell
6
sigmoid colon
6
skeletal muscle tissue
5
A673
5
CD4-positive helper T cell
5
GM06990
5
GM08714
5
GM12864
5
GM12865
5
PC-9
5
Panc1
5
SK-N-MC
5
WERI-Rb-1
5
astrocyte of the cerebellum
5
astrocyte of the hippocampus
5
central memory CD8-positive, alpha-beta T cell
5
dermis blood vessel endothelial cell
5
effector memory CD8-positive, alpha-beta T cell
5
fibroblast of mammary gland
5
fibroblast of pulmonary artery
5
fibroblast of the aortic adventitia
5
fibroblast of villous mesenchyme
5
germinal matrix
5
hematopoietic multipotent progenitor cell
5
iPS DF 19.11
5
lung microvascular endothelial cell
5
mammary gland epithelial cell
5
naive B cell
5
renal cortical epithelial cell
5
retinal pigment epithelial cell
5
skeletal muscle cell
5
smooth muscle cell of the brain vasculature
5
testis
4
AG04449 cell
4
AG04450 cell
4
BE(2)-C
4
BJ cell
4
CD1c-positive myeloid dendritic cell
4
CMK
4
CyT49
4
DND-41
4
Daoy
4
EH
4
EL
4
ELF-1
4
ELR
4
G401
4
GM12891
4
GM12892
4
GM18507
4
H7-hESC
4
HUES48
4
HUES6
4
HUES64
4
HUES8
4
KOPT-K1
4
L1-S8
4
MG63
4
NT2-D1 cell
4
SJCRH30
4
T follicular helper cell
4
T-cell
4
UCSF-4
4
adipose tissue
4
amnion
4
astrocyte of the spinal cord
4
basal cell
4
brain microvascular endothelial cell
4
cardiac fibroblast
4
coronary artery
4
ectodermal cell
4
effector CD4-positive, alpha-beta T cell
4
effector T cell
Organ
2
mammary gland
Life stage
adult
Date released
1
May, 2021
1
October, 2022
Software used
macs
1
abc
1
chromhmm
Lab
1
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
2
AMP
RFA
2
AMP
month_released!
January, 2022
relevant_life_stage!
adult
software_used.software.name!
macs
Showing 2 of 2 results
table-tab-icon
matrix-icon
Download
FileSet
DSR577YXQ
released
Annotation file set
: Binding sites annotation for MCF-7 (MCF-7) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR249DLQ
released
Annotation file set
: enhancer-gene predicton of MCF-7-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP