Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
2
target gene predictions
1
accessible chromatin
1
binding sites
1
chromatin state
1
histone modifications
Annotation Category
6
cis-regulatory elements
2
Target gene links
Annotation type Category
6
ChIP-seq
5
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
7
bed bed3+
1
bed bed9
File set status
8
released
Genome assembly (visualization)
8
hg19
1
GRCh38
Organism
8
Homo sapiens
Biosample type
8
cell line
Biosample term
19
endothelial cell of umbilical vein
17
coronary artery
17
tibial artery
15
ascending aorta
13
aorta
10
dermis blood vessel endothelial cell
10
endothelial cell of hepatic sinusoid
10
thoracic aorta
8
GM12864
8
GM12865
8
MM.1S
8
fibroblast of pulmonary artery
7
pulmonary artery endothelial cell
6
GM10248
6
GM10266
6
smooth muscle cell of the coronary artery
5
Afferent / Efferent Arteriole Endothelial Cell
5
Degenerative Peritubular Capillary Endothelial Cell
5
Glomerular Capillary Endothelial Cell
5
Peritubular Capillary Endothelial Cell
5
fibroblast of the aortic adventitia
4
DND-41
4
KOPT-K1
4
Loucy
4
brain microvascular endothelial cell
4
kidney capillary endothelial cell
4
pancreatic endothelial cell
3
GM13976
3
GM13977
3
GM20000
2
GM12866
2
aortic endothelial cell
2
endothelial cell of coronary artery
2
vein endothelial cell
1
brain microvascular endothelial cell
1
GM08714
1
GM12801
1
SU-DHL-2
1
abdominal aorta artery
1
aorta wall
1
aortic smooth muscle cell
1
circle of Willis
1
whole blood
Organ
8
lymph node
0
blood vessel
Life stage
4
adult
Date released
3
February, 2021
3
September, 2022
1
June, 2020
1
May, 2021
Software used
3
macs
2
r
1
abc
1
chromhmm
1
encode-ccres
Lab
7
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
8
AMP
RFA
8
AMP
files.file_type!
bed gappedPeak
bigWig
Showing 8 of 8 results
table-tab-icon
matrix-icon
Download
FileSet
DSR677EVG
released
Annotation file set
: Candidate regulatory elements for BSS01274 MM.1S from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR127KNA
released
Annotation file set
: Target gene predictions for BSS01274 MM.1S from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR966TYL
released
Annotation file set
: Chromatin states for BSS01274 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR002PIZ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE MM.1S
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR427VFP
released
Annotation file set
: Histone modifications annotation for Blood MMPERIOD1S from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR861GVO
released
Annotation file set
: Binding sites annotation for Blood MMPERIOD1S from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR064TPU
released
Annotation file set
: enhancer-gene predicton of MM.1S-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR718HIX
released
Annotation file set
: Accessible chromatin annotation for Blood MM.1S from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP