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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
binding sites
1
candidate regulatory elements
1
histone modifications
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
3
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
21
subcutaneous adipose tissue
14
adipose tissue
12
omental fat pad
6
subcutaneous abdominal adipose tissue
5
GM12864
5
GM12865
5
MM.1S
4
visceral abdominal adipose tissue
3
GM10248
3
GM10266
3
GM13976
3
GM13977
3
GM20000
2
GM12866
2
adipose tissue derived mesenchymal stem cell
1
omental fat pad
1
DND-41
1
GM08714
1
GM12801
1
KOPT-K1
1
Loucy
1
SU-DHL-2
1
adipose-derived mesenchymal stem cell
1
beige adipocyte
1
mesenchymal stem cell of adipose
1
white adipose cell
1
white adipose tissue
Organ
5
lymph node
0
adipose tissue
Life stage
1
adult
Date released
3
February, 2021
September, 2022
1
June, 2020
1
May, 2021
Software used
3
macs
1
abc
1
encode-ccres
Lab
4
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
5
AMP
RFA
5
AMP
month_released!
September, 2022
Showing 5 of 5 results
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Download
FileSet
DSR002PIZ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE MM.1S
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR427VFP
released
Annotation file set
: Histone modifications annotation for Blood MMPERIOD1S from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR861GVO
released
Annotation file set
: Binding sites annotation for Blood MMPERIOD1S from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR064TPU
released
Annotation file set
: enhancer-gene predicton of MM.1S-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR718HIX
released
Annotation file set
: Accessible chromatin annotation for Blood MM.1S from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP