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Annotation type
2
candidate regulatory elements
1
binding sites
1
chromatin state
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
5
ChIP-seq
3
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
2636
whole blood
41
K562
16
GM12878
8
GM06990
8
GM19240
8
HAP-1
8
HL-60
8
NAMALWA cell
8
OCI-LY7
7
CMK
7
GM12875
7
GM19238
7
GM19239
7
RPMI8226
6
GM12891
6
GM12892
6
KBM-7
6
blood serum
6
peripheral blood mononuclear cell
5
NB4
4
DOHH2
4
GM12873
4
GM18505
4
GM19099
4
GM19193
4
SU-DHL-6
3
GM10847
3
GM12872
3
GM18526
3
GM18951
3
peripheral blood stem cell
2
NAMALWA
2
SUDHL6
2
blood
1
GM12874
1
Karpas-422
1
cerebrospinal fluid
Organ
5
blood
5
bodily fluid
Life stage
4
adult
Date released
3
September, 2022
1
February, 2021
1
October, 2022
Software used
2
chromhmm
2
r
1
encode-ccres
Lab
5
AMP-T2D consortium
Project
5
AMP
Collection Tags
3
EpiMap
2
ENCODE
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR821HQD
released
Annotation file set
: Binding sites annotation for NB4 (NB4) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR222KEP
released
Annotation file set
: Candidate regulatory elements for BSS01356 NB4 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR769BYA
released
Annotation file set
: Target gene predictions for BSS01356 NB4 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR559QPK
released
Annotation file set
: Chromatin states for BSS01356 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR756FYR
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE NB4
Lab:
AMP-T2D consortium
Project:
AMP