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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
7
chromatin state
Annotation Category
7
cis-regulatory elements
Annotation type Category
7
ChIP-seq
Available data
4
bed bed3+
3
bed bed9
File set status
7
released
Genome assembly (visualization)
7
hg19
3
GRCh38
Organism
7
Homo sapiens
Biosample type
tissue
6
in vitro differentiated cells
1
cell line
Biosample term
19
A549
13
common myeloid progenitor, CD34-positive
10
hematopoietic multipotent progenitor cell
9
CD4-positive, alpha-beta memory T cell
8
B cell
8
K562
7
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
6
MCF-7
6
adipocyte
6
endothelial cell of umbilical vein
6
fibroblast of lung
6
mononuclear cell
5
CD14-positive, CD16-negative classical monocyte
5
embryonic stem cell
5
trophoblast cell
4
CD14-positive monocyte
4
HeLa-S3
4
T cell
4
alternatively activated macrophage
4
erythroblast
4
fibroblast of dermis
4
foreskin fibroblast
4
foreskin keratinocyte
4
neural progenitor cell
4
skeletal muscle myoblast
3
CD4-positive, alpha-beta T cell
3
GM12878
3
H1-hESC
3
HepG2
3
SK-N-SH
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
endometrium adenocarcinoma
3
fibroblast of cardiac tissue
3
immortal human breast epithelial cell line cell
3
inflammatory macrophage
3
keratinocyte
3
mammary gland epithelial cell
3
mesenchymal stem cell
3
naive T cell
3
natural killer cell
3
neurosphere
3
regulatory T cell
2
22Rv1
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
BE(2)-C
2
BJ cell
2
Caco-2 cell
2
ESC derived cell line
2
GM06990
2
GM08714
2
GM12864
2
GM12865
2
GM12875
2
GM12891
2
GM12892
2
GM19238
2
GM19239
2
GM19240
2
HEK293
2
HL-60
2
IMR-90
2
KARPAS-422 cell
2
LNCaP clone FGC
2
NAMALWA cell
2
NB4
2
NT2-D1 cell
2
SK-N-DZ
2
SK-N-MC
2
T47D
2
WERI-Rb-1
2
bronchial epithelial cell
2
cardiac muscle cell
2
choroid plexus epithelial cell
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
endodermal cell
2
epithelial cell of prostate
2
epithelial cell of proximal tubule
2
fibroblast of breast
2
fibroblast of mammary gland
2
fibroblast of pulmonary artery
2
fibroblast of villous mesenchyme
2
hepatocyte
2
kidney tubule cell
2
mammary epithelial cell
2
muscle cell
2
myoepithelial cell of mammary gland
2
neutrophil
2
osteoblast
2
retinal pigment epithelial cell
2
skeletal muscle satellite cell
2
skin fibroblast
1
8988T
1
A172
1
A673
1
ACC112
1
ACHN
1
AG08395 cell
1
AG08396 cell
1
AG20443
1
BL-2 cell
1
C4-2B
1
CD1c-positive myeloid dendritic cell
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD8-positive, alpha-beta T cell
1
CMK
1
COLO829
1
CWRU1
1
Caki2
1
DG-75 cell
1
DND-41
1
DND-41 cell
1
DOHH2
1
Daoy
1
ECC-1
1
EH
1
EL
1
ELF-1
1
ELR
1
ES-I3
1
G401
1
GM03348
1
GM04503
1
GM04504
1
GM10248
1
GM10266
1
GM10847
1
GM12801
1
GM12872
1
GM12873
1
GM12874
1
GM15510
1
GM18505
1
GM18507
1
GM18526
1
GM18951
1
GM19099
1
GM19193
1
GM23248
1
GM23338
1
H4
1
H54
1
H7-hESC
1
H9
1
HAC cell
1
HAP-1
1
HBMEC cell
1
HCT-116 cell
1
HCT116
1
HEK293-T-REx cell
1
HEK293T
1
HFF-Myc
1
HGPS cell
1
HK-2 cell
1
HPDE6-E6E7
1
HS-27A
1
HS-5
1
HT-29
1
HT1080
1
HTR-8/Svneo
1
HUES48
1
HUES6
1
HUES64
1
HuH-7
1
HuH-7.5
1
JVM-2 cell
1
KBM-7
1
KMS-11
1
KOPT-K1
1
L1-S8
1
L1-S8R
1
LHCN-M2
1
LoVo cell
1
Loucy
1
M059J
1
MCF10A-Er-Src cell
1
MG63
1
MM.1S
1
NCI-H226 cell
1
NCI-H460 cell
1
NCI-H929
1
NHEK
1
Normal Human Astrocytes
1
OCI-LY1
1
OCI-LY3
1
OCI-LY7
1
PANC-1 cell
1
PC-3
1
PC-9
1
PFSK-1 cell
1
Panc1
1
RCC 7860
Disease term
1
lung large cell carcinoma
Organ
6
connective tissue
1
lung
Life stage
2
unknown
1
adult
Date released
4
August, 2017
3
September, 2022
Software used
9
macs
8
r
7
chromhmm
4
abc
2
encode-ccres
1
deeptools
1
deltasvm
1
samtools
1
umitools
Lab
4
Stephen Parker, UMich
3
AMP-T2D consortium
Project
7
AMP
RFA
7
AMP
biosample_type!
tissue
Showing 7 of 7 results
table-tab-icon
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Download
FileSet
DSR574HYA
released
Annotation file set
: Chromatin states for BSS01360 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR148SNR
released
Annotation file set
: Chromatin states for BSS00039 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR379DHG
released
Annotation file set
: Chromatin states for BSS00038 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR644651
released
Annotation file set
: ChromHMM 13-state model for hASC-t4
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR798156
released
Annotation file set
: ChromHMM 13-state model for hASC-t3
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR104634
released
Annotation file set
: ChromHMM 13-state model for hASC-t2
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR863340
released
Annotation file set
: ChromHMM 13-state model for hASC-t1
Lab:
Stephen Parker, UMich
Project:
AMP