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Schema
Citing CMDGA
Clear Filters
Annotation type
3
gene expression
2
differential activity
1
candidate regulatory elements
1
target gene predictions
Annotation Category
5
Gene expression levels
1
Target gene links
1
cis-regulatory elements
Annotation type Category
5
single cell RNA-seq
2
ChIP-seq
2
DNase-seq
Available data
5
tsv
2
bed bed3+
bed bed9
File set status
7
released
Genome assembly (visualization)
2
hg19
Organism
7
Homo sapiens
Biosample type
7
primary cell
Biosample term
130
monocyte
50
CD8-positive, alpha-beta T cell
47
endothelial cell
41
common myeloid progenitor, CD34-positive
40
B cell
37
fibroblast
36
macrophage
35
hepatocyte
27
CD14-positive monocyte
26
natural killer cell
26
pericyte cell
25
regulatory T cell
24
smooth muscle cell
23
CD4-positive, alpha-beta memory T cell
22
epithelial cell of proximal tubule
20
T-helper 1 cell
20
glomerular endothelial cell
19
pancreatic ductal cell
18
T cell
18
T-helper 17 cell
18
pancreatic beta cell
17
pancreatic alpha cell
16
astrocyte
16
endothelial cell of hepatic sinusoid
16
endothelial cell of umbilical vein
16
osteoblast
16
pancreatic acinar cell
16
pancreatic delta cell
15
CD4-positive, alpha-beta T cell
15
CD8-positive, alpha-beta memory T cell
15
foreskin fibroblast
15
foreskin keratinocyte
15
keratinocyte
14
T-helper 2 cell
14
mast cell
14
mononuclear cell
14
naive thymus-derived CD4-positive, alpha-beta T cell
14
skeletal muscle myoblast
14
trophoblast cell
13
fibroblast of lung
13
mammary epithelial cell
13
neutrophil
12
endothelial cell of lymphatic vessel
12
excitatory neuron
11
erythroblast
11
hepatic stellate cell
11
skeletal muscle satellite cell
10
bronchial epithelial cell
10
glomerular visceral epithelial cell
10
mammary gland epithelial cell
10
neurosphere
9
adipocyte
9
fibroblast of cardiac tissue
9
fibroblast of dermis
9
mature neutrophil
9
memory B cell
9
naive thymus-derived CD8-positive, alpha-beta T cell
9
retinal pigment epithelial cell
9
skeletal muscle fiber
8
dermis blood vessel endothelial cell
8
endocardial cell
8
glutamatergic neuron
8
kidney tubule cell
8
pancreatic stellate cell
7
cardiac muscle cell
7
epithelial cell of prostate
7
fibroblast of mammary gland
7
fibroblast of pulmonary artery
7
fibroblast of villous mesenchyme
7
kidney glomerular epithelial cell
7
kidney interstitial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
mesangial cell
7
myofibroblast cell
7
neuronal stem cell
7
renal cortical epithelial cell
7
skin fibroblast
7
type I muscle cell
7
type II muscle cell
7
type II pneumocyte
6
CD1c-positive myeloid dendritic cell
6
T-cell
6
alternatively activated macrophage
6
choroid plexus epithelial cell
6
colon epithelial cell
6
cortical cell of adrenal gland
6
enterocyte
6
fibroblast of breast
6
gamma-delta T cell
6
kidney epithelial cell
6
luminal epithelial cell of mammary gland
6
mesenchymal stem cell
6
myoepithelial cell of mammary gland
6
naive B cell
6
naive T cell
6
olfactory receptor cell
6
pancreatic polypeptide-secreting cell
6
peripheral blood mononuclear cell
6
plasma cell
6
pulmonary artery endothelial cell
5
cardiac fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
CD14-positive, CD16-negative classical monocyte
5
CD4-positive helper T cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
T follicular helper cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
astrocyte of the cerebellum
5
astrocyte of the hippocampus
5
basal cell
5
central memory CD8-positive, alpha-beta T cell
5
cholangiocyte
5
effector memory CD8-positive, alpha-beta T cell
5
epithelial cell of esophagus
5
foreskin melanocyte
5
gabaergic neuron
5
inflammatory macrophage
5
inhibitory neuron
5
kidney cortex collecting duct principal cell
5
kidney distal convoluted tubule epithelial cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
pancreatic endothelial cell
5
regular ventricular cardiac myocyte
5
skeletal muscle cell
5
smooth muscle cell of the brain vasculature
5
tracheal epithelial cell
4
activated CD4-positive, alpha-beta T cell
4
acute myeloid leukemia cell
4
adult endothelial progenitor cell
4
aortic adventitial fibroblast
4
aortic endothelial cell
4
blood vessel smooth muscle cell
4
brain microvascular endothelial cell
4
cardiac fibroblast
4
dermis lymphatic vessel endothelial cell
4
effector CD4-positive, alpha-beta T cell
4
effector T cell
4
enteric smooth muscle cell
4
erythrocyte
4
fibroblast of peridontal ligament
4
fibroblast of the aortic adventitia
4
iris pigment epithelial cell
4
kidney capillary endothelial cell
4
kidney connecting tubule epithelial cell
4
leukocyte
4
lung microvascular endothelial cell
4
mature natural killer cell
4
megakaryocyte
Disease term
1
Acute kidney failure, unspecified
1
Chronic kidney disease (CKD)
1
acute kidney failure
1
chronic kidney disease
Life stage
5
adult
2
unknown
Date released
5
September, 2023
2
September, 2022
Software used
5
r
2
deseq2
Lab
5
KPMP
2
AMP-T2D consortium
Project
5
KPMP
2
AMP
RFA
5
KPMP
2
AMP
files.file_type!
bed bed9
organ_slims!
skeleton
Showing 7 of 7 results
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Download
FileSet
DSR161ZWO
released
Annotation file set
: Differential activity annotation of Natural Killer T Cell between CKD and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR038LYD
released
Annotation file set
: Differential activity annotation of Natural Killer T Cell between AKI and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR559FQA
released
Annotation file set
: Gene expression annotation of Natural Killer T Cell of healthy individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR418VSB
released
Annotation file set
: Gene expression annotation of Natural Killer T Cell of CKD individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR187RKS
released
Annotation file set
: Gene expression annotation of Natural Killer T Cell of AKI individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR826UMV
released
Annotation file set
: Candidate regulatory elements for BSS00170 regular cardiac myocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR534BXG
released
Annotation file set
: Target gene predictions for BSS00170 regular cardiac myocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP