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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
2
target gene predictions
1
accessible chromatin
1
binding sites
1
chromatin state
1
histone modifications
Annotation Category
6
cis-regulatory elements
2
Target gene links
Annotation type Category
6
ChIP-seq
5
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
7
bed bed3+
1
bed bed9
File set status
8
released
Genome assembly (visualization)
8
hg19
1
GRCh38
Organism
8
Homo sapiens
Biosample type
8
cell line
Biosample term
128
monocyte
90
heart
85
stomach
81
kidney
71
brain
67
lung
67
muscle of arm
64
HeLa-S3
62
A549
62
small intestine
61
adrenal gland
59
placenta
58
muscle of leg
56
large intestine
54
H1-hESC
54
common myeloid progenitor, CD34-positive
54
muscle of back
52
left lung
51
CD8-positive, alpha-beta T cell
51
neural progenitor cell
48
liver
48
thymus
47
B cell
45
right lung
43
hematopoietic multipotent progenitor cell
42
right kidney
41
K562
40
renal cortex interstitium
40
renal pelvis
39
retina
36
islet of Langerhans
36
left kidney
34
spinal cord
33
fibroblast
33
heart left ventricle
33
spleen
32
CD4-positive, alpha-beta memory T cell
31
CD14-positive monocyte
30
adipose tissue
29
adipocyte
28
macrophage
26
MCF-7
26
regulatory T cell
26
smooth muscle cell
25
natural killer cell
24
body of pancreas
24
pericyte cell
24
tibial nerve
23
sigmoid colon
23
trophoblast cell
22
CD8-positive, alpha-beta memory T cell
22
T-helper 1 cell
21
T cell
21
caudate nucleus
21
pancreas
20
T-helper 17 cell
20
breast cancer cell
20
coronary artery
20
mononuclear cell
20
psoas muscle
20
subcutaneous adipose tissue
19
foreskin fibroblast
19
heart right ventricle
19
ovary
18
HFFc6
18
embryonic stem cell
18
gastrocnemius medialis
18
mesenchymal stem cell
18
right atrium auricular region
18
tibial artery
17
HepG2
17
astrocyte
17
cardiac muscle cell
17
muscle of trunk
17
omental fat pad
17
osteoblast
17
thyroid gland
17
transverse colon
16
GM12878
16
T-helper 2 cell
16
chorionic villus
16
fibroblast of cardiac tissue
16
fibroblast of lung
16
induced pluripotent stem cell
16
skeletal muscle myoblast
16
testis
16
upper lobe of left lung
15
CD4-positive, alpha-beta T cell
15
ascending aorta
15
layer of hippocampus
15
skeletal muscle tissue
15
substantia nigra
14
H9
14
cerebellum
14
endocrine pancreas
14
frontal cortex
14
neutrophil
13
Peyer's patch
13
aorta
13
excitatory neuron
13
neurosphere
13
skeletal muscle satellite cell
13
temporal lobe
12
Ammon's horn
12
fibroblast of dermis
12
left renal cortex interstitium
12
neuroblastoma cell
12
neuronal stem cell
12
prostate gland
12
putamen
11
erythroblast
11
hepatic stellate cell
11
left cardiac atrium
11
left renal pelvis
11
naive thymus-derived CD4-positive, alpha-beta T cell
11
right renal pelvis
10
22Rv1
10
Rhabdomyosarcoma
10
gastric cancer cell
10
lymphocyte
10
pancreatic stellate cell
10
progenitor cell of endocrine pancreas
10
right renal cortex interstitium
10
skin fibroblast
10
thoracic aorta
10
trophoblast
9
HEK293
9
SK-N-DZ
9
SK-N-SH
9
cardiomyocytes
9
colonic mucosa
9
diffuse intrinsic pontine glioma
9
liposarcoma
9
parathyroid adenoma
9
tongue
8
B-lymphoblastoid cell line
8
GM12865
8
IMR-90
8
NAMALWA cell
8
cingulate gyrus
8
duodenal mucosa
8
endodermal cell
8
esophagus
8
esophagus muscularis mucosa
8
fibroblast cell line
8
globus pallidus
8
immortal human breast epithelial cell line cell
8
limb
8
lower leg skin
8
mast cell
8
mesendoderm
8
naive T cell
8
pituitary stalk
8
skeletal muscle fiber
8
vagina
7
AG04449 cell
7
AG04450 cell
7
AG09309 cell
7
AG09319 cell
7
AG10803 cell
7
BE(2)-C
7
BJ cell
7
CD1c-positive myeloid dendritic cell
7
CD4-positive helper T cell
7
CMK
7
Caco-2 cell
7
GM06990
7
GM12864
7
HT-29
7
SK-N-MC
7
T47D
7
WERI-Rb-1
7
angular gyrus
7
cardiomyocytes (cardiac muscle cell)
7
chorion membrane
7
endometrium adenocarcinoma
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
eye
7
fibroblast of pulmonary artery
7
foreskin melanocyte
7
mature neutrophil
7
memory B cell
7
right lobe of liver
7
stomach smooth muscle
6
Brodmann (1909) area 46
6
Chondroid Chordoma
6
Daoy
6
GM23248
6
HAP-1
6
HUES8
6
Jurkat
6
KARPAS-422 cell
6
LNCAP
6
LoVo cell
6
MM.1S
6
OCI-LY7
6
PC-9
6
SJSA1
6
SW480
Disease term
3
large-cell immunoblastic lymphoma
Organ
8
blood
8
bodily fluid
Life stage
4
adult
Date released
3
February, 2021
3
September, 2022
1
June, 2020
1
May, 2021
Software used
3
macs
2
r
1
abc
1
chromhmm
1
encode-ccres
Lab
7
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
8
AMP
RFA
8
AMP
organ_slims!
epithelium
software_used.software.name!
qTLtools
Showing 8 of 8 results
table-tab-icon
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Download
FileSet
DSR022BYE
released
Annotation file set
: Candidate regulatory elements for BSS01391 OCI-LY7 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR396NKF
released
Annotation file set
: Target gene predictions for BSS01391 OCI-LY7 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR068AXI
released
Annotation file set
: Chromatin states for BSS01391 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR405QGH
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE OCI-LY7
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR331WWO
released
Annotation file set
: Histone modifications annotation for Blood OCI-LY-7 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR044NOL
released
Annotation file set
: Binding sites annotation for Blood OCI-LY-7 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR666YAE
released
Annotation file set
: enhancer-gene predicton of OCI-LY7-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR622ANU
released
Annotation file set
: Accessible chromatin annotation for Blood OCI-LY-7 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP