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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
1
binding sites
1
histone modifications
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
2
ChIP-seq
2
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
68
lung
62
A549
52
left lung
45
right lung
16
upper lobe of left lung
9
IMR-90
9
fibroblast of lung
7
type II pneumocyte
4
NCI-H226 cell
4
PC-9
4
type I pneumocyte
1
NCI-H226
NCI-H460 cell
1
endothelial cell of artery
1
lung neuroendocrine cell
Organ
4
lung
Life stage
unknown
Date released
2
February, 2021
1
June, 2020
1
May, 2021
Software used
3
macs
1
abc
Lab
3
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
4
AMP
RFA
4
AMP
biosample_term_name!
NCI-H460 cell
organ_slims!
uterus
relevant_life_stage!
unknown
Showing 4 of 4 results
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Download
FileSet
DSR026WMS
released
Annotation file set
: Histone modifications annotation for Lung PC-9 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR997DEX
released
Annotation file set
: Binding sites annotation for Lung PC-9 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR988JBC
released
Annotation file set
: enhancer-gene predicton of PC-9-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR109GCX
released
Annotation file set
: Accessible chromatin annotation for Lung PC-9 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP