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Schema
Clear Filters
Annotation type
2
accessible chromatin
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ATAC-seq
Available data
2
bed bed3+
2
bigWig
File set status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
2
in vitro differentiated cells
Biosample term
2636
whole blood
132
monocyte
89
heart
86
stomach
80
kidney
72
brain
72
endothelial cell
68
lung
66
muscle of arm
64
HeLa-S3
63
small intestine
62
A549
62
adrenal gland
60
placenta
58
muscle of leg
57
B cell
56
large intestine
54
H1-hESC
54
common myeloid progenitor, CD34-positive
54
macrophage
54
muscle of back
52
left lung
51
neural progenitor cell
48
CD8-positive, alpha-beta T cell
48
liver
47
smooth muscle cell
47
thymus
45
T cell
45
adipocyte
45
fibroblast
45
right lung
43
hematopoietic multipotent progenitor cell
43
natural killer cell
42
islet of Langerhans
41
K562
41
hepatocyte
40
right kidney
39
renal cortex interstitium
39
renal pelvis
39
retina
36
left kidney
35
spinal cord
34
cardiac muscle cell
34
spleen
32
CD4-positive, alpha-beta memory T cell
32
heart left ventricle
31
CD14-positive monocyte
31
pancreatic ductal cell
30
adipose tissue
26
MCF-7
26
regulatory T cell
24
epithelial cell of proximal tubule
24
pericyte cell
23
body of pancreas
23
neuron
23
sigmoid colon
22
CD8-positive, alpha-beta memory T cell
22
EndoC_BH1
22
dendritic cell
22
foreskin keratinocyte
21
T-helper 1 cell
21
caudate nucleus
21
keratinocyte
21
trophoblast cell
20
breast cancer cell
20
glomerular endothelial cell
20
mononuclear cell
20
ovary
20
pancreas
20
pigmented layer of retina
20
psoas muscle
20
tibial nerve
19
T-helper 17 cell
19
astrocyte
19
endothelial cell of lymphatic vessel
19
foreskin fibroblast
19
mesenchymal stem cell
19
subcutaneous adipose tissue
18
HFFc6
18
coronary artery
18
embryonic stem cell
18
gastrocnemius medialis
18
heart right ventricle
18
mast cell
18
pancreatic beta cell
18
pericyte
18
substantia nigra
18
thyroid gland
18
transverse colon
17
HepG2
17
endothelial cell of umbilical vein
17
muscle of trunk
17
omental fat pad
17
osteoblast
17
pancreatic acinar cell
17
pancreatic alpha cell
17
right atrium auricular region
17
testis
16
chorionic villus
16
endothelial cell of hepatic sinusoid
16
fibroblast of cardiac tissue
16
fibroblast of lung
16
induced pluripotent stem cell
16
layer of hippocampus
16
retinal pigment epithelial cell
16
skeletal muscle satellite cell
16
skeletal muscle tissue
15
GM12878
15
cerebellum
15
endocardial cell
15
hepatic stellate cell
15
mammary gland epithelial cell
15
pancreatic delta cell
15
tibial artery
14
H9
14
T-helper 2 cell
14
ascending aorta
14
endocrine pancreas
14
frontal cortex
14
neutrophil
14
prostate gland
14
skeletal muscle myoblast
14
upper lobe of left lung
13
Peyer's patch
13
aorta
13
bronchial epithelial cell
13
excitatory neuron
13
neurosphere
13
putamen
12
CD4-positive, alpha-beta T cell
12
fibroblast of dermis
12
lymphoblastoid cell line
12
mammary epithelial cell
12
neuroblastoma cell
12
neuronal stem cell
11
Ammon's horn
11
breast epithelium
11
epithelial cell of prostate
11
glomerular visceral epithelial cell
11
naive thymus-derived CD4-positive, alpha-beta T cell
11
temporal lobe
10
22Rv1
10
Rhabdomyosarcoma
10
esophagus muscularis mucosa
10
esophagus squamous epithelium
10
gastric cancer cell
10
kidney tubule cell
10
left cardiac atrium
10
lymphocyte
10
pancreatic stellate cell
10
progenitor cell of endocrine pancreas
10
right renal pelvis
10
trophoblast
9
SK-N-DZ
9
SK-N-SH
9
cardiomyocytes
9
choroid plexus epithelial cell
9
colonic mucosa
9
diffuse intrinsic pontine glioma
9
erythroblast
9
esophagus
9
left renal cortex interstitium
9
left renal pelvis
9
liposarcoma
9
pancreatic A cell
9
parathyroid adenoma
9
right renal cortex interstitium
9
tongue
8
GM12865
8
HEK293
8
IMR-90
8
NAMALWA cell
8
cingulate gyrus
8
colon epithelial cell
8
dermis blood vessel endothelial cell
8
duodenal mucosa
8
endodermal cell
8
fibroblast cell line
8
immortal human breast epithelial cell line cell
8
limb
8
lower leg skin
8
mesendoderm
8
myoepithelial cell of mammary gland
8
naive T cell
8
pituitary stalk
8
skeletal muscle fiber
8
skin fibroblast
8
type B pancreatic cell
7
B-lymphoblastoid cell line
7
GM06990
7
GM12864
7
HT-29
7
SK-N-MC
7
T47D
7
WERI-Rb-1
7
amygdala
7
angular gyrus
7
chorion membrane
7
dermis lymphatic vessel endothelial cell
7
endometrium adenocarcinoma
Date released
May, 2020
2
November, 2019
Software used
2
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
Collection Tags
1
T2DKP
RFA
2
AMP
month_released!
May, 2020
Showing 2 of 2 results
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Download
FileSet
DSR163OWK
released
Annotation file set
: Induced Pluripotent Stem Cell derived from fibroblasts accessible chromatin annotation of overlapping ATAC-seq sites from 2 samples with most significant peak selected
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR003GNM
released
Annotation file set
: Induced Pluripotent Stem Cell derived from beta-cells accessible chromatin annotation of overlapping ATAC-seq sites from 3 samples with most significant peak selected
Lab:
AMP-T2D consortium
Project:
AMP