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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
1
binding sites
1
histone modifications
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
small intestine
42
large intestine
18
sigmoid colon
15
transverse colon
10
Peyer's patch
9
colon epithelial cell
8
colonic mucosa
7
HT-29
7
duodenal mucosa
7
mucosa of rectum
6
SW480
6
enterocyte
6
muscle layer of colon
6
muscle layer of duodenum
5
HCT116
4
HCT-116 cell
4
enteric smooth muscle cell
4
rectum smooth muscle tissue
3
RKO
2
enterocyte of epithelium of small intestine
2
paneth cell
2
small intestine goblet cell
1
Crypt of Lieberkuhn
1
colon
1
colon - sigmoid
1
colon - transverse
1
colon sigmoid
1
crypt of Lieberkuhn
1
intestinal epithelial cell
1
intestinal epithelium
1
small intestine - terminal Ileum
Organ
3
intestine
3
large intestine
Date released
2
February, 2021
1
June, 2020
Software used
3
macs
encode-ccres
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
small intestine
month_released!
February, 2023
software_used.software.name!
encode-ccres
Showing 3 of 3 results
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Download
FileSet
DSR823SVP
released
Annotation file set
: Histone modifications annotation for Digestive tract RKO from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR612HZP
released
Annotation file set
: Binding sites annotation for Digestive tract RKO from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR501BQN
released
Annotation file set
: Accessible chromatin annotation for Digestive tract RKO from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP