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Getting started
Schema
Clear Filters
Annotation type
2
candidate regulatory elements
2
target gene predictions
1
chromatin state
Annotation Category
3
cis-regulatory elements
2
Target gene links
Annotation type Category
4
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
2636
whole blood
133
monocyte
108
heart
104
stomach
94
kidney
93
fibroblast
91
endothelial cell
88
brain
86
head of caudate nucleus
84
muscle of arm
82
lung
81
placenta
76
adrenal gland
75
A549
75
small intestine
73
macrophage
72
CD8-positive, alpha-beta T cell
70
muscle of leg
70
smooth muscle cell
69
large intestine
69
muscle of back
68
HeLa-S3
68
T-cell
67
left lung
66
common myeloid progenitor, CD34-positive
64
B cell
64
CD4-positive, alpha-beta T cell
59
dorsolateral prefrontal cortex
56
thymus
55
right lung
55
stimulated activated CD4-positive, alpha-beta T cell
54
hematopoietic multipotent progenitor cell
53
H1-hESC
52
neural progenitor cell
52
right kidney
51
hepatocyte
51
renal cortex interstitium
50
natural killer cell
49
liver
49
renal pelvis
48
posterior cingulate gyrus
47
K562
45
adipocyte
45
left kidney
44
T cell
44
heart left ventricle
44
islet of Langerhans
42
retina
39
CD14-positive monocyte
39
spinal cord
38
cardiac muscle cell
38
spleen
37
CD4-positive, alpha-beta memory T cell
34
pericyte
33
activated CD4-positive, alpha-beta T cell
33
keratinocyte
32
MCF-7
32
glutamatergic neuron
31
T-helper 1 cell
31
adipose tissue
31
astrocyte
30
pancreatic ductal cell
29
heart right ventricle
28
T-helper 17 cell
28
body of pancreas
28
ovary
27
naive thymus-derived CD4-positive, alpha-beta T cell
27
tibial nerve
27
trophoblast cell
26
CD8-positive, alpha-beta memory T cell
26
T-helper 2 cell
26
epithelial cell of proximal tubule
26
pancreas
26
regulatory T cell
25
stimulated activated CD8-positive, alpha-beta memory T cell
24
dendritic cell
24
endothelial cell of lymphatic vessel
24
neuron
24
pericyte cell
24
psoas muscle
23
EndoC_BH1
23
H9
23
foreskin keratinocyte
23
gastrocnemius medialis
23
sigmoid colon
22
GABAergic neuron
22
HCT116
22
caudate nucleus
22
foreskin fibroblast
22
upper lobe of left lung
21
coronary artery
21
endothelial cell of umbilical vein
21
glomerular endothelial cell
21
thyroid gland
20
breast cancer cell
20
mononuclear cell
20
naive thymus-derived CD8-positive, alpha-beta T cell
20
right atrium auricular region
20
subcutaneous adipose tissue
20
testis
20
tibial artery
19
HFFc6
19
endocardial cell
19
mesenchymal stem cell
19
omental fat pad
19
transverse colon
18
ascending aorta
18
embryonic stem cell
18
hepatic stellate cell
18
mast cell
18
muscle of trunk
18
pancreatic beta cell
18
pigmented layer of retina
17
HepG2
17
erythroblast
17
fibroblast of lung
16
Peyer's patch
16
cerebellum
16
chorionic villus
16
endothelial cell of hepatic sinusoid
16
frontal cortex
16
induced pluripotent stem cell
16
layer of hippocampus
16
left renal cortex interstitium
16
skeletal muscle satellite cell
16
substantia nigra
15
GM12878
15
activated T-cell
15
fibroblast of cardiac tissue
15
pancreatic acinar cell
15
pancreatic alpha cell
15
pancreatic delta cell
14
activated CD8-positive, alpha-beta memory T cell
14
aorta
14
bronchial epithelial cell
14
endocrine pancreas
14
left renal pelvis
14
mammary epithelial cell
14
mammary gland epithelial cell
14
retinal pigment epithelial cell
14
right renal pelvis
14
skeletal muscle myoblast
14
skeletal muscle tissue
13
dermis blood vessel endothelial cell
13
excitatory neuron
13
fibroblast of dermis
13
left cardiac atrium
13
naive B cell
12
Ammon's horn
12
breast epithelium
12
colonic mucosa
12
glomerular visceral epithelial cell
12
osteoblast
11
SK-N-SH
11
epithelial cell of prostate
11
lymphoblastoid cell line
11
neurosphere
11
neutrophil
11
progenitor cell of endocrine pancreas
11
thoracic aorta
10
IMR-90
10
SK-N-DZ
10
endodermal cell
10
foreskin melanocyte
10
gastric cancer cell
10
inflammatory macrophage
10
kidney tubule cell
10
neuroblastoma cell
10
neuronal stem cell
10
prostate gland
10
putamen
10
thyroid follicular cell
9
22Rv1
9
HAP-1
9
Rhabdomyosarcoma
9
WI38
9
cardiomyocytes
9
choroid plexus epithelial cell
9
diffuse intrinsic pontine glioma
9
esophagus
9
esophagus muscularis mucosa
9
esophagus squamous epithelium
9
eye
9
liposarcoma
9
lower leg skin
9
progenitor cell
9
temporal lobe
8
B Cell
8
HT-29
8
LNCaP clone FGC
8
PC-9
8
T47D
8
WERI-Rb-1
8
cingulate gyrus
8
colon epithelial cell
8
duodenal mucosa
8
epithelial cell of esophagus
8
fibroblast cell line
8
immortal human breast epithelial cell line cell
8
lymphocyte
Organ
5
skin of body
Life stage
4
adult
Date released
3
September, 2022
1
February, 2021
1
July, 2026
June, 2020
Software used
2
r
1
chromhmm
1
encode-ccres
Lab
5
AMP-T2D consortium
Project
5
AMP
Collection Tags
3
EpiMap
1
ENCODE
1
ENCODE-rE2G
RFA
5
AMP
month_released!
June, 2020
Showing 5 of 5 results
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Download
FileSet
DSR837063
released
Annotation file set
: Target gene predictions for RPMI7951 (EFO:0005712) derived from ENCODE-rE2G (ENCSR517RZQ).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR319EDV
released
Annotation file set
: Candidate regulatory elements for BSS01536 RPMI7951 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR395YGG
released
Annotation file set
: Target gene predictions for BSS01536 RPMI7951 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR011XDK
released
Annotation file set
: Chromatin states for BSS01536 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR991XXY
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE RPMI7951
Lab:
AMP-T2D consortium
Project:
AMP