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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
90
heart
63
small intestine
34
heart left ventricle
22
foreskin keratinocyte
21
coronary artery
21
keratinocyte
19
foreskin fibroblast
19
heart right ventricle
19
right atrium auricular region
17
fibroblast of cardiac tissue
12
fibroblast of dermis
12
left cardiac atrium
12
skin fibroblast
10
dermis blood vessel endothelial cell
10
lower leg skin
9
duodenal mucosa
8
dermis lymphatic vessel endothelial cell
8
muscle layer of duodenum
8
right cardiac atrium
7
GM23248
7
smooth muscle cell of the coronary artery
6
iPS DF 4.7 Cell Line
6
skin of body
5
RPMI7951
5
SK-MEL-5
5
iPS DF 19.11
5
left ventricle myocardium
4
cardiac fibroblast
4
dermis microvascular lymphatic vessel endothelial cell
4
iPS DF 19.7
4
iPS DF 6.9
4
iPS-11a
4
iPS-15b
4
iPS-18a
4
iPS-18c
4
iPS-20b
3
COLO829
3
endocardial cell
3
epidermal melanocyte
3
suprapubic skin
2
basal cell of epidermis
2
cardiac endothelial cell
2
cardiac muscle myoblast
2
endothelial cell of coronary artery
2
enterocyte of epithelium of small intestine
2
granular cell of epidermis
2
skin of forearm
2
skin of prepuce of penis
2
small intestine goblet cell
2
ventricular cardiac muscle cell
1
BJ
1
HGPS cell
1
aortic valve
1
cardiac atrium fibroblast
1
cardiac ventricle
1
cardiac ventricle fibroblast
1
fetal heart
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
iPS DF 4.7
1
mitral valve
1
pulmonary valve
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
1
tricuspid valve
Disease term
3
melanoma
Organ
5
skin of body
0
heart
0
small intestine
Life stage
4
adult
Date released
3
September, 2022
1
February, 2021
1
June, 2020
Software used
2
r
1
chromhmm
1
encode-ccres
1
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
organ_slims!
large intestine
Showing 5 of 5 results
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Download
FileSet
DSR319EDV
released
Annotation file set
: Candidate regulatory elements for BSS01536 RPMI7951 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR395YGG
released
Annotation file set
: Target gene predictions for BSS01536 RPMI7951 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR011XDK
released
Annotation file set
: Chromatin states for BSS01536 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR991XXY
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE RPMI7951
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR752EOW
released
Annotation file set
: Accessible chromatin annotation for Epidermis RPMI-7951 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP