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Schema
Citing CMDGA
Clear Filters
Annotation type
3
target gene predictions
Annotation Category
3
Target gene links
Annotation type Category
3
ATAC-seq
1
DNase-seq
1
H3K27ac ChIP-Seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
1
tissue
Biosample term
127
monocyte
43
CD8-positive, alpha-beta T cell
32
endothelial cell
29
fibroblast
28
macrophage
25
hepatocyte
20
smooth muscle cell
19
pericyte cell
16
endothelial cell of hepatic sinusoid
16
pancreatic acinar cell
16
pancreatic beta cell
16
pancreatic ductal cell
15
CD14-positive monocyte
15
regulatory T cell
14
pancreatic alpha cell
14
pancreatic delta cell
12
astrocyte
12
excitatory neuron
11
B cell
11
T-helper 1 cell
11
erythroblast
10
T cell
10
T-helper 17 cell
10
naive thymus-derived CD4-positive, alpha-beta T cell
9
endothelial cell of umbilical vein
9
memory B cell
9
naive thymus-derived CD8-positive, alpha-beta T cell
9
skeletal muscle fiber
9
skeletal muscle satellite cell
8
glutamatergic neuron
8
pancreatic stellate cell
7
CD4-positive, alpha-beta T cell
7
keratinocyte
7
mature neutrophil
7
natural killer cell
7
neutrophil
7
osteoblast
7
type I muscle cell
7
type II muscle cell
7
type II pneumocyte
6
T-helper 2 cell
6
alternatively activated macrophage
6
colon epithelial cell
6
cortical cell of adrenal gland
6
enterocyte
6
mesenchymal stem cell
6
naive B cell
6
olfactory receptor cell
6
pancreatic polypeptide-secreting cell
6
skeletal muscle myoblast
5
cardiac fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
CD14-positive, CD16-negative classical monocyte
5
CD4-positive helper T cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
T follicular helper cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
basal cell
5
cardiac muscle cell
5
central memory CD8-positive, alpha-beta T cell
5
effector memory CD8-positive, alpha-beta T cell
5
epithelial cell of proximal tubule
5
gabaergic neuron
5
glomerular endothelial cell
5
inflammatory macrophage
5
inhibitory neuron
5
pancreatic endothelial cell
4
activated CD4-positive, alpha-beta T cell
4
adipocyte
4
blood vessel smooth muscle cell
4
effector CD4-positive, alpha-beta T cell
4
effector T cell
4
endothelial cell of lymphatic vessel
4
enteric smooth muscle cell
4
fibroblast of lung
4
foreskin fibroblast
4
gamma-delta T cell
4
hepatic stellate cell
4
kidney glomerular epithelial cell
4
luminal epithelial cell of mammary gland
4
mammary epithelial cell
4
mast cell
4
mature natural killer cell
4
megakaryocyte
4
memory T cell
4
memory regulatory T cell
4
mesothelial cell
4
myofibroblast cell
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
renal cortical epithelial cell
4
retinal pigment epithelial cell
4
smooth muscle cell of the esophagus
4
type I pneumocyte
3
Cycling Mononuclear Phagocyte
3
Mast Cell
3
Schwann cell
3
activated CD8-positive, alpha-beta T cell
3
blood cell
3
choroid plexus epithelial cell
3
ciliated cell
3
club cell
3
endocardial cell
3
enteric neuron
3
fibroblast of cardiac tissue
3
glial cell
3
glomerular visceral epithelial cell
3
goblet cell
3
kidney epithelial cell
3
kidney tubule cell
3
leukocyte
3
mammary gland epithelial cell
3
mesangial cell
3
microglial cell
3
naive B cel
3
naive regulatory T cell
3
naive t cell
3
oligodendrocyte
3
oligodendrocyte precursor cell
3
pancreatic A cell
3
pancreatic quiescent stellate cell
3
parietal cell
3
peptic cell
3
plasma cell
3
plasmacytoid dendritic cell
3
schwann cell
3
skin fibroblast
3
smooth muscle cell of the coronary artery
3
thyroid follicular cell
3
type B pancreatic cell
2
Muller cell
2
T-cell
2
acute myeloid leukemia cell
2
alveolar macrophage
2
aortic adventitial fibroblast
2
articular chondrocyte
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
basal cell of epidermis
2
bone marrow cell
2
brain pericyte
2
capillary endothelial cell
2
cardiac endothelial cell
2
colon goblet cell
Organ
3
epithelium
3
pancreas
Date released
February, 2021
2
November, 2021
1
May, 2021
Software used
3
abc
Lab
2
Bing Ren, UCSD
1
Jesse Engreitz, Stanford University
Project
2
ENCODE
1
AMP
RFA
2
ENCODE3
1
AMP
month_released!
February, 2021
September, 2022
Showing 3 of 3 results
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Download
FileSet
DSR855IQO
released
Annotation file set
: Target gene predictions of Pancreatic Beta Cell 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR451TRZ
released
Annotation file set
: Target gene predictions of Pancreatic Beta Cell 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR633DNL
released
Annotation file set
: enhancer-gene predicton of pancreatic-beta-cell-AMP from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP