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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
67
muscle of arm
58
muscle of leg
54
muscle of back
44
islet of Langerhans
25
pancreatic ductal cell
24
body of pancreas
22
pancreas
20
EndoC_BH1
20
psoas muscle
18
gastrocnemius medialis
18
pancreatic acinar cell
18
pancreatic beta cell
17
muscle of trunk
17
pancreatic alpha cell
16
pancreatic delta cell
16
skeletal muscle tissue
15
endocrine pancreas
13
skeletal muscle satellite cell
11
esophagus muscularis mucosa
10
pancreatic stellate cell
9
skeletal muscle fiber
9
stomach smooth muscle
7
LHCN-M2
7
gastroesophageal sphincter
7
type I muscle cell
7
type II muscle cell
6
pancreatic polypeptide-secreting cell
6
skeletal muscle cell
5
A673
5
Panc1
5
SJCRH30
5
gastrocnemius medialis(Muscle - Skeletal)
5
left ventricle myocardium
5
myotube
4
pancreatic A cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
4
rectum smooth muscle tissue
4
type B pancreatic cell
3
8988T
3
HPDE6-E6E7
3
pancreatic quiescent stellate cell
2
hindlimb muscle
2
muscle of leg
2
cardiac muscle myoblast
2
forelimb muscle
2
pancreatic endocrine cell
2
respiratory system smooth muscle
2
skeletal muscle
2
somatic muscle myotube
1
activated pancreatic stellate cell
1
aortic smooth muscle cell
1
esophagus - gastroesophageal junction
1
esophagus - muscularis
1
hindlimb muscle
1
pancreatic D cell
1
pancreatic PP cell
1
quiescent pancreatic stellate cell
1
rectal smooth muscle tissue
1
smooth muscle tissue
Organ
5
musculature of body
0
pancreas
Life stage
3
child
1
young adult
Date released
3
September, 2022
1
February, 2021
1
June, 2020
Software used
2
r
1
chromhmm
1
encode-ccres
1
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
month_released!
November, 2019
Showing 5 of 5 results
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Download
FileSet
DSR213OLP
released
Annotation file set
: Candidate regulatory elements for BSS01549 SJCRH30 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR359BQQ
released
Annotation file set
: Target gene predictions for BSS01549 SJCRH30 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR863JWS
released
Annotation file set
: Chromatin states for BSS01549 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR746IZY
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE SJCRH30
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR907POK
released
Annotation file set
: Accessible chromatin annotation for Muscle SJCRH30 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP