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Clear Filters
Annotation type
  • 5candidate regulatory elements
  • 3target gene predictions
  • 1chromatin state
Annotation Category
  • 6cis-regulatory elements
  • 3Target gene links
Annotation type Category
  • 8DNase-seq
  • 7ChIP-seq
Available data
  • 8bed bed3+
  • 1bed bed9
File set status
  • 9released
Genome assembly (visualization)
  • 7hg19
  • 3GRCh38
Organism
  • 9Homo sapiens
Biosample type
  • 9cell line
Biosample term
  • 82lung
  • 76A549
  • 67left lung
  • 56right lung
  • 23upper lobe of left lung
  • 18fibroblast of lung
  • 11IMR-90
  • 10PC-9
  • 10progenitor cell
  • 9WI38
  • 7H9
  • 7lung microvascular endothelial cell
  • 7type II pneumocyte
  • 4NCI-H226 cell
  • 4NCI-H460 cell
  • 4fibroblast
  • 4lung multiciliated epithelial cell
  • 4smooth muscle cell
  • 4type I pneumocyte
  • 3lower lobe of left lung
  • 2H7
  • 2NCI-H226
  • 2NCI-H460
  • 2bronchial epithelial cell
  • 2endothelial cell of lymphatic vessel
  • 2endothelial cell of vascular tree
  • 2macrophage
  • 2megakaryocyte
  • 2mesothelial cell
  • 2pericyte
  • 2pulmonary neuroendocrine cell
  • 1Calu3
  • 1H54
  • 1endothelial cell of artery
  • 1fibroblast of pulmonary artery
  • 1lower lobe of right lung
  • 1lung neuroendocrine cell
  • 1pulmonary artery endothelial cell
  • 1upper lobe of right lung
Organ
  • 9lung
Life stage
  • 7unknown
Date released
  • 4February, 2021
  • 3September, 2022
  • 2July, 2026
Software used
  • 4encode-ccres
  • 2r
  • 1chromhmm
Lab
  • 9AMP-T2D consortium
Project
  • 9AMP
Collection Tags
  • 4ENCODE
  • 3EpiMap
  • 2ENCODE-rE2G
RFA
  • 9AMP

Showing 9 of 9 results

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  • FileSet

    DSR026565

    released

    Annotation file set: Target gene predictions for WI38 (EFO:0001260) derived from ENCODE-rE2G (ENCSR545RFV).
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR013817

    released

    Annotation file set: Target gene predictions for WI38 (EFO:0001260) derived from ENCODE-rE2G (ENCSR605MTG).
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR557XAK

    released

    Annotation file set: Candidate regulatory elements for BSS01891 WI38 from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR913NXZ

    released

    Annotation file set: Target gene predictions for BSS01891 WI38 from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR703OYT

    released

    Annotation file set: Chromatin states for BSS01891 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR965GFJ

    released

    Annotation file set: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE WI38
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR786NMP

    released

    Annotation file set: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE WI38
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR612TGV

    released

    Annotation file set: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE WI38
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR729GNY

    released

    Annotation file set: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE WI38
    Lab: AMP-T2D consortium
    Project: AMP
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