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Schema
Citing CMDGA
Clear Filters
Annotation type
5
chromatin state
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
in vitro differentiated cells
Biosample term
20
heart
18
brain
16
muscle of arm
15
lung
15
muscle of leg
14
placenta
14
stomach
13
kidney
13
large intestine
13
left lung
13
muscle of back
13
small intestine
11
right lung
11
thymus
10
right kidney
9
left kidney
9
renal cortex interstitium
9
renal pelvis
8
adrenal gland
spinal cord
6
CD4-positive, alpha-beta memory T cell
6
endothelial cell of umbilical vein
6
left cardiac atrium
5
adipocyte
5
embryonic stem cell
5
fibroblast of lung
5
heart left ventricle
5
trophoblast cell
4
chorionic villus
4
erythroblast
4
foreskin fibroblast
4
foreskin keratinocyte
4
heart right ventricle
4
liver
4
muscle of trunk
4
neural progenitor cell
3
CD14-positive, CD16-negative classical monocyte
3
H1-hESC
3
HepG2
3
SK-N-SH
3
T-helper 17 cell
3
chorion membrane
3
common myeloid progenitor, CD34-positive
3
fibroblast of dermis
3
islet of Langerhans
3
keratinocyte
3
neurosphere
3
retina
3
skeletal muscle myoblast
2
22Rv1
2
AG04449 cell
2
AG04450 cell
2
B cell
2
BE(2)-C
2
BJ cell
2
CD8-positive, alpha-beta memory T cell
2
ESC derived cell line
2
GM06990
2
GM08714
2
GM12864
2
GM12865
2
GM12891
2
GM12892
2
HEK293
2
IMR-90
2
K562
2
NAMALWA cell
2
NT2-D1 cell
2
SK-N-DZ
2
SK-N-MC
2
WERI-Rb-1
2
alternatively activated macrophage
2
bronchial epithelial cell
2
cardiac muscle cell
2
choroid plexus epithelial cell
2
dermis lymphatic vessel endothelial cell
2
endodermal cell
2
epithelial cell of prostate
2
epithelial cell of proximal tubule
2
eye
2
fibroblast of cardiac tissue
2
fibroblast of mammary gland
2
fibroblast of pulmonary artery
2
fibroblast of villous mesenchyme
2
germinal matrix
2
hepatocyte
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
mammary epithelial cell
2
mature neutrophil
2
neutrophil
2
osteoblast
2
retinal pigment epithelial cell
2
right renal cortex interstitium
2
right renal pelvis
2
skin fibroblast
2
spleen
2
tongue
2
trophoblast
1
A549
1
A673
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
BL-2 cell
1
CD14-positive monocyte
1
CD1c-positive myeloid dendritic cell
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD8-positive, alpha-beta T cell
1
CMK
1
CWRU1
1
Caco-2 cell
1
DG-75 cell
1
DND-41
1
DND-41 cell
1
Daoy
1
ECC-1
1
EH
1
EL
1
ELF-1
1
ELR
1
ES-I3
1
G401
1
GM03348
1
GM10847
1
GM12801
1
GM12872
1
GM12873
1
GM12874
1
GM12875
1
GM12878
1
GM15510
1
GM18505
1
GM18507
1
GM18526
1
GM18951
1
GM19099
1
GM19193
1
GM19238
1
GM19239
1
GM19240
1
H7-hESC
1
H9
1
HAC cell
1
HBMEC cell
1
HCT-116 cell
1
HEK293-T-REx cell
1
HEK293T
1
HFF-Myc
1
HGPS cell
1
HK-2 cell
1
HL-60
1
HTR-8/Svneo
1
HUES48
1
HUES6
1
HUES64
1
HeLa-S3
1
JVM-2 cell
1
KARPAS-422 cell
1
KOPT-K1
1
L1-S8
1
L1-S8R
1
MCF-7
1
MCF10A-Er-Src cell
1
MG63
1
NB4
1
NCI-H460 cell
1
NHEK
1
Normal Human Astrocytes
1
PANC-1 cell
1
PC-9
1
PFSK-1 cell
1
Panc1
1
Raji cell
1
SAEC
1
SH-SY5Y cell
1
SJCRH30
1
SK-N-SH_RA
1
SUDHL5
1
T cell
1
T-47D cell
1
T-helper 1 cell
1
T-helper 2 cell
1
U-266 cell
1
U-87 MG
1
U2OS
1
UCSF-4
1
WI-38 cell
1
WI38
1
Z-138
1
amnion
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
aortic adventitial fibroblast
1
arm bone
1
astrocyte
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
Organ
5
connective tissue
Life stage
adult
1
unknown
Date released
4
August, 2017
1
September, 2022
Software used
14
macs
6
qTLtools
5
chromhmm
4
abc
3
r
1
deeptools
1
deltasvm
1
encode-ccres
1
samtools
1
umitools
Lab
4
Stephen Parker, UMich
1
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
biosample_term_name!
spinal cord
relevant_life_stage!
adult
Showing 5 of 5 results
table-tab-icon
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Download
FileSet
DSR379DHG
released
Annotation file set
: Chromatin states for BSS00038 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR644651
released
Annotation file set
: ChromHMM 13-state model for hASC-t4
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR798156
released
Annotation file set
: ChromHMM 13-state model for hASC-t3
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR104634
released
Annotation file set
: ChromHMM 13-state model for hASC-t2
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR863340
released
Annotation file set
: ChromHMM 13-state model for hASC-t1
Lab:
Stephen Parker, UMich
Project:
AMP