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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
eQTL
1
accessible chromatin
Annotation Category
2
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
2
Expression arrays
2
RNA-seq
1
ATAC-seq
Available data
1
bed bed3+
1
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
24
neural progenitor cell
10
kidney
6
liver
4
cartilage tissue
4
hepatocyte
4
subcutaneous adipose tissue
3
cardiac fibroblast
3
adipose tissue
2
SGBS preadipocytes
2
aorta
2
blood
2
brain
2
cardiac muscle cell
2
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
heart
2
heart left ventricle
2
omental fat pad
1
hindlimb muscle
1
Ammon's horn
1
HepG2
1
ascending aorta
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
brain pericyte
1
caudate nucleus
1
cerebellar cortex
1
cerebellum
1
cerebrospinal fluid
1
choroid plexus epithelial cell
1
coronary artery
1
endothelial cell
1
epithelial cell of proximal tubule
1
fetal heart
1
forelimb muscle
1
frontal cortex
1
globus pallidus
1
glomerular endothelial cell
1
heart right ventricle
1
hepatic stellate cell
1
kidney capillary endothelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
kidney tubule cell
1
left cardiac atrium
1
left renal pelvis
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
middle frontal gyrus
1
muscle of arm
1
muscle of leg
1
occipital lobe
1
pons
1
progenitor cell
1
proximal tubule cells with injury markers
1
putamen
1
renal cortex interstitium
1
renal cortical epithelial cell
1
renal intercalated cell
1
renal pelvis
1
renal principal cell
1
retina
1
retinal pigment epithelial cell
1
right atrium auricular region
1
right cardiac atrium
1
right renal pelvis
1
skeletal muscle cell
1
skeletal muscle tissue
1
smooth muscle cell of the brain vasculature
1
superior temporal gyrus
1
synovial joint
1
tibial artery
1
tibial nerve
Organ
3
adipose tissue
3
connective tissue
Life stage
1
adult
1
unknown
Date released
18
September, 2022
2
August, 2021
2
February, 2021
1
January, 2020
1
January, 2022
1
March, 2020
1
May, 2020
1
May, 2021
1
November, 2022
Software used
1
emmax
1
macs
1
unknown
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
files.file_type!
tsv
organ_slims!
pancreas
Showing 3 of 3 results
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Download
FileSet
DSR401QNJ
released
Annotation file set
: eQTL annotation of adipose from PMID:28838971
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR961WUZ
released
Annotation file set
: eQTL annotation of human adipose from PMID:20016592
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR849UDT
released
Annotation file set
: Adipose subcutaneous accessible chromatin annotation
Lab:
AMP-T2D consortium
Project:
AMP