Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
target gene predictions
Annotation Category
3
Target gene links
Annotation type Category
1
Capture-C
1
HiC
1
pCHi-C
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
1
primary cell
1
stem cell
1
tissue
Biosample term
2
CD4-positive, alpha-beta T cell
1
B cell
1
CD8-positive, alpha-beta T cell
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
HepG2
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
activated CD4-positive, alpha-beta T cell
1
adult endothelial progenitor cell
1
alternatively activated macrophage
1
cardiomyocytes (cardiac muscle cell)
1
erythroblast
1
inflammatory macrophage
1
islet of Langerhans
1
lymphocyte of B lineage (iPSC)
1
macrophage
1
megakaryocyte
1
monocyte
1
naive B cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
neutrophil
1
thymus
1
undifferentiated ESC (H9 cell line)
1
white adipose cell
Organ
1
brain
1
connective tissue
1
pancreas
Life stage
1
adult
Date released
1
January, 2020
1
May, 2020
1
September, 2023
Software used
16
r
9
qTLtools
7
macs
7
matrix-eQTL
3
chicago
3
chromhmm
2
fastqtl
1
deltasvm
1
spp
Lab
2
AMP-T2D consortium
1
Struan F.A. Grant, CHOP
Project
3
AMP
RFA
2
AMP
1
AMP2
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR284RGT
released
Annotation file set
: Target gene predictions annotation of EGAS00001001911 promoter capture Hi-C of adult endothelial progenitor cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR299XDW
released
Annotation file set
: Target gene prediction annotation derived from chromatin loops in islet pcHi-C
Lab:
AMP-T2D consortium
Project:
AMP