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Schema
Citing CMDGA
Clear Filters
Annotation type
1
Fine-mapped variants
1
candidate regulatory elements
Annotation Category
1
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
1
RNA-seq
Available data
1
bed bed3+
1
tsv
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
21
stomach
18
heart
17
lung
17
muscle of arm
15
kidney
15
muscle of back
14
adrenal gland
14
large intestine
14
muscle of leg
14
small intestine
13
brain
13
left lung
12
placenta
11
renal cortex interstitium
11
right lung
10
renal pelvis
10
right kidney
9
left kidney
9
spleen
9
thymus
7
spinal cord
6
heart left ventricle
6
liver
5
body of pancreas
5
sigmoid colon
5
subcutaneous abdominal adipose tissue
4
Peyer's patch
4
chorionic villus
4
esophagus squamous epithelium
4
gastrocnemius medialis
4
gastroesophageal sphincter
4
left renal cortex interstitium
4
left renal pelvis
4
lower leg skin
4
muscle of trunk
4
omental fat pad
4
ovary
4
right renal pelvis
4
substantia nigra
4
testis
4
thyroid gland
4
tibial nerve
4
transverse colon
4
upper lobe of left lung
3
ascending aorta
3
breast epithelium
3
caudate nucleus
3
endocrine pancreas
3
esophagus muscularis mucosa
3
heart right ventricle
3
layer of hippocampus
3
pancreas
3
parathyroid adenoma
3
psoas muscle
3
retina
3
right renal cortex interstitium
3
skeletal muscle tissue
3
subcutaneous adipose tissue
3
suprapubic skin
3
temporal lobe
2
Ammon's horn
2
angular gyrus
2
aorta
2
cerebellum
2
chorion
2
cingulate gyrus
2
colonic mucosa
2
coronary artery
2
duodenal mucosa
2
esophagus
2
eye
2
middle frontal area 46
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
2
placental basal plate
2
prostate gland
2
putamen
2
right atrium auricular region
2
right lobe of liver
2
stomach smooth muscle
2
thoracic aorta
2
tibial artery
2
tongue
2
trophoblast
2
uterus
2
vagina
1
C1 segment of cervical spinal cord
1
adipose tissue
1
amnion
1
amygdala
1
anterior cingulate cortex
1
cerebellar cortex
1
cerebellum (Hemisphere)
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
femur
1
forelimb muscle
1
frontal cortex
1
gastrocnemius medialis(Muscle - Skeletal)
1
germinal matrix
1
globus pallidus
1
hindlimb muscle
1
hypothalamus
1
left cardiac atrium
1
left leg bone
1
left ventricle myocardium
1
limb
1
middle frontal gyrus
1
mucosa of stomach
1
nucleus accumbens
1
rectal smooth muscle tissue
1
right arm bone
1
right cardiac atrium
1
umbilical cord
1
urinary bladder
Organ
1
brain
1
extraembryonic component
Life stage
1
adult
1
embryonic
Date released
1
February, 2021
1
March, 2020
Software used
8
r
3
chromhmm
2
macs
1
deltasvm
1
encode-ccres
1
gtex_eqtl:V8
1
gtex_finemapping_eQTL:caveman
1
gtex_finemapping_eQTL:caviar
1
gtex_finemapping_eQTL:dapg
1
qTLtools
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
Showing 2 of 2 results
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Download
FileSet
DSR896FWW
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE amnion
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR813SYV
released
Annotation file set
: Fine-mapping results from DAPG of frontal cortex for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP