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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
73
brain
35
fibroblast
32
adipose tissue
29
adipocyte
24
pericyte cell
22
caudate nucleus
21
subcutaneous adipose tissue
19
foreskin fibroblast
19
mesenchymal stem cell
18
omental fat pad
18
substantia nigra
17
fibroblast of cardiac tissue
17
osteoblast
16
cerebellum
16
fibroblast of lung
16
frontal cortex
16
layer of hippocampus
15
putamen
14
temporal lobe
12
Ammon's horn
12
fibroblast of dermis
12
hepatic stellate cell
12
skin fibroblast
10
SK-N-DZ
10
SK-N-SH
10
angular gyrus
10
choroid plexus epithelial cell
10
pancreatic stellate cell
10
pituitary stalk
9
cingulate gyrus
8
SK-N-MC
8
fibroblast of mammary gland
8
fibroblast of pulmonary artery
8
fibroblast of villous mesenchyme
8
globus pallidus
8
midbrain
7
BE(2)-C
7
GM23248
7
amygdala
7
chondrocyte
7
hypothalamus
7
mesangial cell
7
nucleus accumbens
6
Brodmann (1909) area 46
6
Daoy
6
anterior cingulate cortex
6
astrocyte of the cerebellum
6
astrocyte of the hippocampus
6
cerebellum (Hemisphere)
6
medulla oblongata
6
middle frontal gyrus
6
pons
6
subcutaneous abdominal adipose tissue
5
cardiac fibroblast
5
A172
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Fibroblast
5
M059J
5
Mesangial Cell
5
brain microvascular endothelial cell
5
cardiac fibroblast
5
cartilage tissue
5
cerebellar cortex
5
fibroblast of peridontal ligament
5
fibroblast of the aortic adventitia
5
fibroblast of the conjunctiva
4
H54
4
HT1080
4
U-87 MG
4
adult endothelial progenitor cell
4
bone tissue
4
brain pericyte
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
fibroblast of gingiva
4
inferior parietal cortex
4
medulloblastoma
4
preadipocyte
4
stromal cell of bone marrow
4
visceral abdominal adipose tissue
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
dorsolateral prefrontal cortex
3
pancreatic quiescent stellate cell
3
prefrontal cortex
3
pulmonary interstitial fibroblast
2
adipose tissue derived mesenchymal stem cell
2
articular chondrocyte
2
columnar chondrocyte
2
extracellular matrix secreting cell
2
fat cell
2
hippocampal neuron
2
luteal cell
2
middle frontal area 46
2
pituitary gland
2
stromal cell
1
brain microvascular endothelial cell
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
BE2C
1
Brodmann (1909) area 9
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Glioblastoma
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Preadipose SGBS cell line (adipocyte)
1
SGBS preadipocytes
1
activated pancreatic stellate cell
1
adipose-derived mesenchymal stem cell
1
anterior parahippocampal gyrus
1
arcuate nucleus of hypothalamus
1
bed nucleus of stria terminalis
1
beige adipocyte
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
cerebellar hemisphere
1
claustrum of brain
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
dentate nucleus
1
diencephalon
1
dorsal lateral geniculate nucleus
1
dura mater
1
embryonic fibroblast
1
entorhinal cortex
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
frontal pole
1
kidney interstitial fibroblast
1
locus ceruleus
1
medial dorsal nucleus of thalamus
1
mesenchymal stem cell of adipose
1
mid-frontal lobe
1
myelencephalon
1
nucleus of ventral thalamus
1
paraventricular nucleus of hypothalamus
1
pericardium fibroblast
1
pineal body
1
piriform cortex
1
pituitary
1
pontine tegmentum
1
precentral gyrus
1
pulvinar nucleus
1
quiescent pancreatic stellate cell
1
raphe nuclei
1
red nucleus
1
septal nuclear complex
1
subiculum
1
superior parietal cortex
1
temporal pole
1
thalamic complex
1
undifferentiated ESC (H9 cell line)
1
white adipose cell
1
white adipose tissue
Organ
3
connective tissue
3
extraembryonic component
0
brain
Life stage
3
embryonic
Date released
3
September, 2022
Software used
2
r
1
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
H1-hESC
breast cancer cell
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR185KCG
released
Annotation file set
: Candidate regulatory elements for BSS00250 amnion mesenchymal stem cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR189QPE
released
Annotation file set
: Target gene predictions for BSS00250 amnion mesenchymal stem cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR785XTM
released
Annotation file set
: Chromatin states for BSS00250 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP