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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
1
binding sites
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
snATAC-seq
1
ChIP-seq
Available data
3
bed bed3+
1
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
3
LHCN-M2
2
cardiac muscle myoblast
2
muscle of leg
2
myotube
2
respiratory system smooth muscle
2
skeletal muscle fiber
2
skeletal muscle satellite cell
2
somatic muscle myotube
2
type I muscle cell
2
type II muscle cell
1
hindlimb muscle
1
SJCRH30
1
aortic smooth muscle cell
1
esophagus muscularis mucosa
1
forelimb muscle
1
gastrocnemius medialis
1
muscle of arm
1
psoas muscle
1
skeletal muscle cell
1
skeletal muscle tissue
1
smooth muscle tissue
Organ
3
musculature of body
1
blood vessel
1
vasculature
Life stage
1
unknown
Date released
1
February, 2021
1
February, 2024
1
May, 2022
November, 2021
Software used
3
macs
1
deeptools
1
eigenmt
1
qTLtools
1
r
1
rasqual
1
samtools
1
umitools
Lab
2
AMP-T2D consortium
1
Stephen Parker, UMich
Project
3
AMP
RFA
2
AMP
1
AMP2
month_released!
November, 2021
Showing 3 of 3 results
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Download
FileSet
DSR331TEA
released
Annotation file set
: Accessible chromatin from snATAC-seq of type II muscle cell from human skeletal muscle
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR152SRX
released
Annotation file set
: Binding sites annotation for Cardiovascular Aortic_smooth_muscle_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR816KKF
released
Annotation file set
: Cell type chromatin broad peaks and bw of type II muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP