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Annotation type
2
differential activity
1
candidate regulatory elements
1
gene expression
1
target gene predictions
Annotation Category
2
Gene expression levels
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ATAC-seq
2
RNA-seq
File set status
5
released
Genome assembly (visualization)
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
2636
whole blood
21
coronary artery
20
endothelial cell of umbilical vein
19
tibial artery
16
ascending aorta
16
endothelial cell of hepatic sinusoid
13
aorta
11
thoracic aorta
10
dermis blood vessel endothelial cell
8
fibroblast of pulmonary artery
7
pulmonary artery endothelial cell
7
smooth muscle cell of the coronary artery
6
aorta wall
5
Afferent / Efferent Arteriole Endothelial Cell
5
Degenerative Peritubular Capillary Endothelial Cell
5
Glomerular Capillary Endothelial Cell
5
Peritubular Capillary Endothelial Cell
5
artery
5
brain microvascular endothelial cell
5
fibroblast of the aortic adventitia
5
kidney capillary endothelial cell
4
aortic endothelial cell
4
internal thoracic artery
4
pancreatic endothelial cell
2
capillary endothelial cell
2
endothelial cell of coronary artery
2
vein endothelial cell
1
brain microvascular endothelial cell
1
abdominal aorta artery
1
aortic smooth muscle cell
1
circle of Willis
1
placental villus capillary endothelial cell
Organ
5
artery
5
blood vessel
5
vasculature
Life stage
5
adult
Date released
5
October, 2025
Software used
2
dreamlet
1
archr
1
scanpy
1
sce2g
Lab
5
AMP-T2D consortium
Project
5
AMP
Collection Tags
5
STARNET
RFA
5
AMP
Showing 5 of 5 results
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FileSet
DSR936629
released
Annotation file set
: The dataset contains differentially accessible cCREs between CAD and control in human artery, derived from STARNET ATAC-seq data (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR849587
released
Annotation file set
: The dataset contains differentially expressed genes between CAD and control in human artery, derived from STARNET RNA-seq data (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR007425
released
Annotation file set
: The dataset contains gene expression levels in human artery, derived from STARNET RNA-seq data (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR668686
released
Annotation file set
: The dataset contains cCRE–target gene links in human artery, predicted from STARNET ATAC-seq data with detailed annotation (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR673078
released
Annotation file set
: The dataset contains candidate cis-regulatory elements (cCREs) in human artery, derived from STARNET ATAC-seq data (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP