Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
63
small intestine
40
renal pelvis
34
spinal cord
12
left renal pelvis
12
right renal pelvis
9
duodenal mucosa
8
muscle layer of duodenum
5
C1 segment of cervical spinal cord
4
astrocyte of the spinal cord
2
enterocyte of epithelium of small intestine
2
small intestine goblet cell
Organ
4
spinal cord
0
small intestine
0
ureter
Life stage
4
unknown
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR081MBE
released
Annotation file set
: Candidate regulatory elements for BSS00092 astrocyte of the spinal cord from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR761GRM
released
Annotation file set
: Target gene predictions for BSS00092 astrocyte of the spinal cord from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR755QZV
released
Annotation file set
: Chromatin states for BSS00092 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR693SGT
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE astrocyte of the spinal cord
Lab:
AMP-T2D consortium
Project:
AMP