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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
57
heart
57
stomach
48
brain
48
lung
48
muscle of arm
45
small intestine
42
adrenal gland
42
kidney
42
placenta
39
left lung
39
muscle of back
39
muscle of leg
38
large intestine
33
right lung
33
thymus
30
right kidney
27
left kidney
27
renal cortex interstitium
27
renal pelvis
21
liver
21
spinal cord
18
adipose tissue
18
spleen
15
heart left ventricle
15
sigmoid colon
12
body of pancreas
12
chorionic villus
12
endocrine pancreas
12
gastrocnemius medialis
12
muscle of trunk
12
ovary
12
psoas muscle
12
thyroid gland
12
transverse colon
9
Peyer's patch
9
caudate nucleus
9
chorion membrane
9
heart right ventricle
9
layer of hippocampus
9
retina
9
skeletal muscle tissue
9
testis
9
tibial nerve
9
upper lobe of left lung
6
Brodmann (1909) area 46
6
angular gyrus
6
aorta
6
ascending aorta
6
breast epithelium
6
cerebellum
6
cingulate gyrus
6
colonic mucosa
6
coronary artery
6
duodenal mucosa
6
esophagus
6
esophagus muscularis mucosa
6
esophagus squamous epithelium
6
eye
6
frontal cortex
6
left renal cortex interstitium
6
left renal pelvis
6
limb
6
lower leg skin
6
mucosa of rectum
6
muscle layer of colon
6
muscle layer of duodenum
6
omental fat pad
6
pancreas
6
parathyroid adenoma
6
prostate gland
6
right atrium auricular region
6
right renal cortex interstitium
6
right renal pelvis
6
stomach smooth muscle
6
substantia nigra
6
temporal lobe
6
thoracic aorta
6
tibial artery
6
tongue
6
trophoblast
6
urinary bladder
6
vagina
3
Ammon's horn
3
amnion
3
arm bone
3
cerebellar cortex
3
embryonic facial prominence
3
femur
3
gastroesophageal sphincter
3
germinal center
3
germinal matrix
3
globus pallidus
3
inferior parietal cortex
3
left cardiac atrium
3
leg bone
3
medulla oblongata
3
midbrain
3
middle frontal gyrus
3
mucosa of stomach
3
occipital lobe
3
pons
3
putamen
3
rectum smooth muscle tissue
3
right cardiac atrium
3
right lobe of liver
3
skin of body
3
superior temporal gyrus
3
umbilical cord
3
uterus
1
islet of Langerhans
Organ
3
liver
Life stage
3
adult
Date released
3
March, 2020
3
September, 2022
2
February, 2021
1
February, 2020
1
January, 2020
Software used
2
r
1
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
cardiogenic mesoderm
Showing 3 of 3 results
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Download
FileSet
DSR656SPH
released
Annotation file set
: Candidate regulatory elements for BSS01519 right lobe of liver from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR041IUM
released
Annotation file set
: Target gene predictions for BSS01519 right lobe of liver from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR449UIO
released
Annotation file set
: Chromatin states for BSS01519 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP