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Schema
Citing CMDGA
Clear Filters
Annotation type
2
eQTL
1
variant allelic effects
Annotation Category
3
Genetic variant effects
Annotation type Category
2
RNA-seq
1
DNase-seq
Available data
bed bed3+
bed bed9
2
bigBed bed9
2
bigWig
File set status
3
released
Genome assembly (visualization)
2
GRCh38
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
15
islet of Langerhans
9
subcutaneous adipose tissue
8
liver
7
induced pluripotent stem cell
7
macrophage
7
mature neutrophil
7
putamen
6
caudate nucleus
6
lymphoblastoid cell line
6
monocyte
6
substantia nigra
5
CD14-positive, CD16-negative classical monocyte
5
amygdala
5
anterior cingulate cortex
5
cerebellum
5
coronary artery
5
frontal cortex
5
hepatocyte
5
hypothalamus
5
nucleus accumbens
5
omental fat pad
5
right atrium auricular region
5
tibial artery
5
tibial nerve
4
Ammon's horn
4
C1 segment of cervical spinal cord
4
alternatively activated macrophage
4
ascending aorta
4
body of pancreas
4
cerebellum (Hemisphere)
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endothelial cell of hepatic sinusoid
4
gastrocnemius medialis(Muscle - Skeletal)
4
left ventricle myocardium
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neutrophil
4
right lobe of liver
3
CD4-positive, alpha-beta T cell
3
EndoC_BH1
3
adipose tissue
3
blood cell
3
cartilage tissue
3
inflammatory macrophage
3
skin of body
2
Adaptive / Maladaptive / Repairing Fibroblast
2
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
2
Afferent / Efferent Arteriole Endothelial Cell
2
B Cell
2
Classical Dendritic Cell
2
Connecting Tubule Cell
2
Connecting Tubule Intercalated Cell Type A
2
Connecting Tubule Principal Cell
2
Cortical Thick Ascending Limb Cell
2
Cycling Endothelial Cell
2
Cycling Epithelial Cell
2
Cycling T Cell
2
Cytotoxic T Cell
2
Degenerative Connecting Tubule Cell
2
Degenerative Connecting Tubule Cell / Principal Cell
2
Degenerative Cortical Thick Ascending Limb Cell
2
Degenerative Distal Convoluted Tubule Cell
2
Degenerative Intercalated Cell Type A
2
Degenerative Peritubular Capillary Endothelial Cell
2
Degenerative Principal Cell
2
Degenerative Proximal Tubule Epithelial Cell
2
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
2
Degenerative Vascular Smooth Muscle Cell
2
Descending Thin Limb Cell Type 1
2
Distal Convoluted Tubule Cell Type 1
2
Fibroblast
2
Glomerular Capillary Endothelial Cell
2
Intercalated Cell Type A
2
Intercalated Cell Type B
2
Lymphatic Endothelial Cell
2
M2 Macrophage
2
Medullary Thick Ascending Limb Cell
2
Mesangial Cell
2
Monocyte
2
Monocyte-derived Cell
2
Myofibroblast
2
Natural Killer T Cell
2
Natural Killer T Cell Type 1
2
Natural Killer T Cell Type 2
2
Non-Classical Monocyte
2
Parietal Epithelial Cell
2
Peritubular Capillary Endothelial Cell
2
Plasma Cell
2
Plasmacytoid Dendritic Cell
2
Podocyte
2
Principal Cell
2
Proximal Tubule Epithelial Cell Segment 1 and 2
2
Proximal Tubule Epithelial Cell Segment 3
2
Regulatory T Cell
2
Renin-positive Juxtaglomerular Granular Cell
2
T Cell
2
T cell
2
Transitional Principal-Intercalated Cell
2
Vascular Smooth Muscle Cell / Pericyte
2
adipose-derived stem cell
2
articular chondrocyte
2
blood
2
brain
2
differentiating adipose-derived stem cell
2
erythroblast
2
fibroblast
2
iPSC derived cell line
2
muscle
2
regulatory T cell
2
skeletal muscle tissue
2
visceral abdominal adipose tissue
1
BL-2 cell
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD8-positive, alpha-beta T cell
1
DG-75 cell
1
JVM-2 cell
1
KARPAS-422 cell
1
Leydig cell
1
Pancreatic islets
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
SUDHL5
1
T follicular helper cell
1
T-helper 1 cell
1
T-helper 17 cell
1
T-helper 2 cell
1
U-266 cell
1
Z-138
1
abdominal aorta artery
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adrenal gland
1
aorta wall
1
breast
1
cerebellar hemisphere
1
colon sigmoid
1
cortex
1
cortex of kidney
1
dorsolateral prefrontal cortex
1
embryonic stem cell
1
endothelial cell of umbilical vein
1
esophagus
1
esophagus mucosa
1
esophagus muscularis mucosa
1
fat cell
1
globus pallidus
1
glomerular endothelial cell
1
heart left ventricle
1
helper T cell
1
hepatic stellate cell
1
kidney capillary endothelial cell
1
kidney glomerular epithelial cell
1
layer of hippocampus
1
left renal cortex interstitium
1
lung
1
mature eosinophil
1
medulla oblongata
1
microglial cell
1
midbrain
1
middle frontal gyrus
1
minor salivary gland
1
myocyte
1
naive B cel
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell
1
neural progenitor cell
1
neuron cell of Hypothalamus (neuron)
1
ovary
1
pancreas
1
pancreatic acinar cell
1
pancreatic ductal cell
1
pituitary gland
1
placenta
1
pons
1
progenitor cell
1
prostate gland
1
renal glomerulus
1
retina
1
right kidney
1
right renal cortex interstitium
1
sensory neuron
1
skeletal muscle
1
skeletal muscle myoblast
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
superior temporal gyrus
1
synovial joint
1
testis
1
thyroid gland
1
transverse colon
1
uterus
1
vagina
Organ
3
brain
Life stage
1
adult
Date released
2
January, 2022
1
May, 2020
Software used
2
qTLtools
1
deltasvm
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
files.file_type!
bed bed3+
bed bed9
software_used.software.name!
r
Showing 3 of 3 results
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Download
FileSet
DSR191XXQ
released
Annotation file set
: brain naive eQTL of studay ROSMAP from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR999BSN
released
Annotation file set
: brain eQTL of studay BrainSeq from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR631KSB
released
Annotation file set
: Variant allelic effects of globus pallidus ENCODE DHSseq
Lab:
AMP-T2D consortium
Project:
AMP