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Annotation type
1
caQTL
1
eQTL
Annotation Category
2
Genetic variant effects
Annotation type Category
1
ATAC-seq
1
RNA-seq
Available data
1
bed bed3+
File set status
2
released
Genome assembly (visualization)
1
hg18
1
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
2
liver
1
endothelial cell
1
mesenchymal stem cell
1
omental fat pad
1
smooth muscle cell
1
subcutaneous adipose tissue
1
type I muscle cell
1
type II muscle cell
Organ
2
liver
Life stage
1
adult
Date released
1
August, 2021
1
May, 2022
Software used
53
r
29
chromhmm
21
encode-ccres
13
macs
3
qTLtools
1
abc
1
bimbam
1
deltasvm
1
deseq2
1
eigenmt
1
emmax
1
haploview
1
hiccups
1
mach2qtl
1
nospecificsoft_customcode
1
rasqual
1
snap
1
unknown
Lab
1
AMP-T2D consortium
1
Karen Mohlke, UNC
Project
2
AMP
RFA
2
AMP
Showing 2 of 2 results
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Download
FileSet
DSR797VBE
released
Annotation file set
: caQTL annotation of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab:
Karen Mohlke, UNC
Project:
AMP
FileSet
DSR606JYM
released
Annotation file set
: eQTLS in different tissues: liver (960 samples)
Lab:
AMP-T2D consortium
Project:
AMP