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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
1
chromatin state
Annotation Category
4
cis-regulatory elements
Annotation type Category
3
DNase-seq
1
ChIP-seq
Available data
3
bed bed3+
1
bed bed9
1
bigBed bed9
1
bigWig
File set status
4
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
4
heart
4
pancreas
3
cardiac fibroblast
3
Ammon's horn
3
SGBS preadipocytes
3
brain
3
caudate nucleus
3
endothelial cell of umbilical vein
3
frontal cortex
3
kidney
3
putamen
3
right atrium auricular region
3
stomach
3
tibial artery
2
B cell
2
Rh-4 cell
2
acute myeloid leukemia cell
2
aorta
2
bone marrow cell
2
brain pericyte
2
cardiac muscle cell
2
choroid plexus epithelial cell
2
coronary artery
2
erythroid cell
2
fibroblast of cardiac tissue
2
globus pallidus
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
heart left ventricle
hepatic stellate cell
2
hepatocyte
2
islet of Langerhans
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
monocyte
2
muscle of leg
2
occipital lobe
2
omental fat pad
2
osteoblast
2
pons
2
regulatory T cell
2
renal cortical epithelial cell
2
renal pelvis
2
retina
2
retinal pigment epithelial cell
2
skin fibroblast
2
spinal cord
2
superior temporal gyrus
2
tibial nerve
1
hindlimb muscle
1
786-O cell
1
A-673 cell
1
A172
1
A549
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
B-Lymphocytes
1
B-lymphocyte
1
BE(2)-C
1
BJ cell
1
C1 segment of cervical spinal cord
1
CD1c-positive myeloid dendritic cell
1
CD4-Positive T-Lymphocytes
1
CD4-positive helper T cell
1
CD8-positive, alpha-beta T cell
1
CMK
1
COLO-829 cell
1
COLO205
1
Caco-2 cell
1
Caki2
1
D341 Med cell
1
DG-75 cell
1
Daoy
1
ECC-1
1
G-401 cell
1
GM03348
1
GM04503
1
GM04504
1
GM06990
1
GM10248
1
GM10266
1
GM12864
1
GM12865
1
GM12878
1
GM13976
1
GM13977
1
GM18507
1
GM19240
1
GM20000
1
GM23248
1
GP5d
1
Glioblastoma
1
H1-hESC
1
H4
1
H7-hESC
1
HAC cell
1
HAP-1
1
HBMEC cell
1
HCT-116 cell
1
HEK293
1
HGF
1
HL-60
1
HT-29
1
HUES6
1
HUES8
1
HeLa cell
1
HepG2
1
Hodgkin lymphoma cell line
1
HuH-7
1
HuTu-80 cell
1
IMR-90
1
Ishikawa
1
Jurkat
1
K562
1
KARPAS-422 cell
1
KBM-7
1
Kasumi-1
1
L-1236 cell
1
L-428 cell
1
L1-S8
1
L1-S8R
1
LHCN-M2
1
LNCAP
1
LoVo cell
1
M059J
1
MCF-7
1
MCF10A-Er-Src cell
1
MDA-MB-231 cell
1
MG63
1
MM.1S
1
MOLM-13 cell
1
Myoblasts
1
NAMALWA cell
1
NB-4 cell
1
NCCIT cell
1
NCI-H226 cell
1
NHBE cell
1
NHDF cell
1
NHEK
1
NT2-D1 cell
1
Normal Human Astrocytes
1
OCI-AML3
1
OCI-LY7
1
PA-TU-8988T cell
1
PANC-1 cell
1
PC-3
1
PC-9
1
Peyer's patch
1
RCC 7860
1
REH cell
1
RKO
1
RPMI7951
1
RPMI8226
1
RS4-11 cell
1
RWPE1
1
Rh-5 cell
1
Rhabdomyosarcoma
1
SAEC
1
SJCRH30
1
SJSA1
1
SK-CO-1
1
SK-N-DZ
1
SK-N-MC
1
SK-N-SH_RA
1
SKH1-Hr hr
1
SKMC
1
SUDHL5
1
SW1116
1
SW480
1
Saos-2 cell
1
T cell
1
T-47D cell
1
T-helper 1 cell
1
T84
1
Th1 cell
1
Th17 cell
1
Th2 cell
1
U-266 cell
1
U-87 MG
1
U2OS
1
U937
1
WERI-Rb-1
1
WI-38 cell
1
Z-138
1
ZR-75-1 cell
1
acute myeloid leukemia
1
adipocyte
1
adipose tissue
1
adipose-derived mesenchymal stem cell
1
adrenal gland
1
amygdala
1
anterior cingulate cortex
1
aortic adventitial fibroblast
1
ascending aorta
1
astrocyte of the cerebellum
Organ
3
brain
1
extraembryonic component
1
placenta
Life stage
2
fetal
Date released
90
September, 2022
32
February, 2021
3
January, 2022
2
January, 2020
2
June, 2020
1
February, 2020
1
May, 2020
1
May, 2021
1
November, 2019
Software used
3
macs
1
chromhmm
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_term_name!
hepatic stellate cell
Showing 4 of 4 results
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Download
FileSet
DSR953MXQ
released
Annotation file set
: Accessible chromatin annotation for Placenta Placenta from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR147QJJ
released
Annotation file set
: Accessible chromatin annotation for Neural Fetal brain from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR833MWK
released
Annotation file set
: ChromHMM 15-state model for fetal brain male from ENCODE ChIP-seq data. ROADMAP fetal brain male
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR271FEH
released
Annotation file set
: Accessible chromatin annotation of brain fetal from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP