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Schema
Citing CMDGA
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Assay category
2
DNA binding
1
3D chromatin structure
1
DNA accessibility
Assay
2
ChIP-seq
1
DNase-seq
1
Hi-C
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
4
Homo sapiens
Target of assay
RNA binding protein
1
control
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Biosample type
4
primary cell
Organ
4
blood vessel
4
brain
4
epithelium
4
vasculature
Life stage
4
unknown
Available data
4
bigWig
3
bam
2
bed bed3+
2
bed broadPeak
2
bed narrowPeak
2
bigBed broadPeak
2
bigBed narrowPeak
2
fastq
1
hdf5
Platform
2
Illumina Genome Analyzer
Run type
2
single-ended
Read length (nt)
2
36
Library made from
4
DNA
Date released
2
November, 2017
1
July, 2019
1
June, 2019
Lab
4
AMP-T2D consortium
Replication type
3
isogenic
1
unreplicated
month_released!
November, 2018
target.investigated_as!
RNA binding protein
Showing 4 of 4 results
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Experiment
DSR240JNB
released
Hi-C
of brain microvascular endothelial cell
Homo sapiens
brain microvascular endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR958JRF
released
DNase-seq
of brain microvascular endothelial cell
Homo sapiens
brain microvascular endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR007495
released
ChIP-seq
of brain microvascular endothelial cell
Homo sapiens
brain microvascular endothelial cell
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR138847
released
ChIP-seq
of brain microvascular endothelial cell
Homo sapiens
brain microvascular endothelial cell
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP