Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
chromatin state
1
accessible chromatin
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
2
bed bed9
2
bigBed bed9
1
bed bed3+
1
bigWig
File set status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
cell line
Biosample term
3
cardiac fibroblast
2
Ammon's horn
2
SGBS preadipocytes
2
aorta
2
brain
2
cardiac muscle cell
2
caudate nucleus
2
coronary artery
2
endothelial cell of umbilical vein
2
frontal cortex
2
heart
2
heart left ventricle
2
kidney
2
omental fat pad
2
pancreas
2
putamen
2
right atrium auricular region
2
tibial artery
1
hindlimb muscle
1
C1 segment of cervical spinal cord
1
adipose tissue
1
amygdala
1
anterior cingulate cortex
1
ascending aorta
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
body of pancreas
1
brain microvascular endothelial cell
1
brain pericyte
1
cerebellar cortex
1
cerebellum
1
cerebellum (Hemisphere)
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
fetal heart
1
forelimb muscle
1
globus pallidus
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
heart right ventricle
1
hepatic stellate cell
1
hepatocyte
1
hypothalamus
1
islet of Langerhans
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
left cardiac atrium
1
left renal pelvis
1
middle frontal gyrus
1
muscle of arm
1
muscle of leg
1
nucleus accumbens
1
occipital lobe
1
pons
1
renal cortex interstitium
1
renal cortical epithelial cell
1
renal pelvis
1
retina
1
retinal pigment epithelial cell
1
right cardiac atrium
1
right lobe of liver
1
right renal pelvis
1
skeletal muscle cell
1
smooth muscle cell of the brain vasculature
subcutaneous adipose tissue
1
substantia nigra
1
superior temporal gyrus
1
tibial nerve
Organ
3
epithelium
2
blood vessel
2
vasculature
2
vein
1
kidney
Life stage
1
child
Date released
30
February, 2021
9
September, 2022
3
January, 2020
3
May, 2020
2
June, 2020
1
August, 2017
1
August, 2021
1
February, 2020
1
March, 2020
1
May, 2021
1
October, 2022
Software used
2
chromhmm
1
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
subcutaneous adipose tissue
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR214PMG
released
Annotation file set
: ChromHMM 18-state model for endothelial cell of umbilical vein from ENCODE ChIP-seq data. ROADMAP HUVEC Umbilical Vein Endothelial Primary Cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR772SPX
released
Annotation file set
: ChromHMM 15-state model for endothelial cell of umbilical vein from ENCODE ChIP-seq data. ROADMAP HUVEC Umbilical Vein Endothelial Primary Cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR855KHX
released
Annotation file set
: Accessible chromatin annotation of kidney podocytes (glomerular visceral epithelial cell) from GSE115961 DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP