Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
tissue
Biosample term
85
heart
73
brain
72
kidney
67
muscle of arm
62
lung
62
stomach
59
placenta
57
muscle of leg
55
large intestine
54
muscle of back
54
small intestine
53
H1-hESC
52
HeLa-S3
52
left lung
51
neural progenitor cell
47
thymus
45
right lung
42
right kidney
40
renal cortex interstitium
40
renal pelvis
36
left kidney
35
adrenal gland
34
spinal cord
32
endothelial cell
30
CD8-positive, alpha-beta T cell
30
fibroblast
28
islet of Langerhans
28
macrophage
28
monocyte
24
smooth muscle cell
23
CD4-positive, alpha-beta memory T cell
23
EndoC_BH1
22
foreskin keratinocyte
22
liver
22
pancreatic ductal cell
22
pericyte cell
21
K562
20
B cell
20
breast cancer cell
20
keratinocyte
20
trophoblast cell
19
HFFc6
19
heart left ventricle
18
adipocyte
18
embryonic stem cell
18
endothelial cell of umbilical vein
18
foreskin fibroblast
18
hepatocyte
17
T-helper 17 cell
17
retina
16
astrocyte
16
cardiac muscle cell
16
chorionic villus
16
muscle of trunk
16
regulatory T cell
16
retinal pigment epithelial cell
15
H9
15
HepG2
15
induced pluripotent stem cell
14
heart right ventricle
14
osteoblast
13
T cell
13
bronchial epithelial cell
13
excitatory neuron
13
fibroblast of cardiac tissue
13
mesenchymal stem cell
13
neurosphere
13
pancreatic acinar cell
13
pancreatic beta cell
12
left renal cortex interstitium
12
lymphoblastoid cell line
12
neuroblastoma cell
12
pancreatic delta cell
11
common myeloid progenitor, CD34-positive
11
left cardiac atrium
11
left renal pelvis
11
right renal pelvis
11
spleen
10
22Rv1
10
GM12878
10
Rhabdomyosarcoma
10
choroid plexus epithelial cell
10
epithelial cell of prostate
10
fibroblast of lung
10
gastric cancer cell
10
lymphocyte
10
neutrophil
10
progenitor cell of endocrine pancreas
10
right renal cortex interstitium
10
skeletal muscle myoblast
10
skin fibroblast
10
trophoblast
9
HEK293
9
SK-N-DZ
9
T-helper 1 cell
9
T-helper 2 cell
9
cardiomyocytes
9
diffuse intrinsic pontine glioma
9
erythroblast
9
liposarcoma
9
mammary gland epithelial cell
9
neuronal stem cell
9
pancreatic alpha cell
9
tongue
8
B-lymphoblastoid cell line
8
GM06990
8
GM12864
8
GM12865
8
IMR-90
8
NAMALWA cell
8
colon epithelial cell
8
endodermal cell
8
fibroblast cell line
8
limb
8
pancreatic stellate cell
8
skeletal muscle fiber
8
testis
7
AG04449 cell
7
AG04450 cell
7
BE(2)-C
7
BJ cell
7
CD1c-positive myeloid dendritic cell
7
CD4-positive, alpha-beta T cell
7
CD8-positive, alpha-beta memory T cell
7
CMK
7
MG63
7
SK-N-MC
7
SK-N-SH
WERI-Rb-1
7
chorion membrane
7
dermis lymphatic vessel endothelial cell
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
eye
7
fibroblast of dermis
7
fibroblast of pulmonary artery
7
foreskin melanocyte
7
glomerular endothelial cell
7
hematopoietic multipotent progenitor cell
7
mammary epithelial cell
7
memory B cell
7
mesendoderm
7
ovary
7
skeletal muscle satellite cell
7
skeletal muscle tissue
6
Chondroid Chordoma
6
Daoy
6
GM08714
6
GM12891
6
GM12892
6
GM18507
6
HUES6
6
HUES8
6
MCF-7
6
WI38
6
cardiac precursors (cardiac muscle cell)
6
chondrocyte
6
fibroblast of mammary gland
6
fibroblast of villous mesenchyme
6
glomerular visceral epithelial cell
6
hESC cell
6
iPSC derived cell line
6
mesodermal cell
6
naive thymus-derived CD4-positive, alpha-beta T cell
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
neuroblastoma cell line
6
pancreas
6
type I muscle cell
5
CD4-positive helper T cell
5
CyT49
5
Ewing sarcoma
5
GM19240
5
H7-hESC
5
HK-2 cell
5
HUES64
5
Jurkat
5
NT2-D1 cell
5
PC-9
5
SGBS preadipocytes
5
acute myeloid leukemia
5
adipose tissue
5
enterocyte
5
kidney epithelial cell
5
natural killer cell
5
neural cell
5
non-pigmented ciliary epithelial cell
5
osteosarcoma
5
prostate cancer cell line
5
psoas muscle
5
pulmonary artery endothelial cell
5
renal cortical epithelial cell
5
skeletal muscle cell
5
skin of body
5
umbilical cord
4
A549
4
A673
4
AG09309 cell
4
AG09319 cell
4
AG10803 cell
4
B-lymphocyte
Organ
1
breast
1
epithelium
Life stage
adult
Date released
1
June, 2020
Software used
1
macs
Lab
1
AMP-T2D consortium
Jesse Engreitz, Stanford University
Project
1
AMP
RFA
1
AMP
biosample_term_name!
WERI-Rb-1
lab.title!
Jesse Engreitz, Stanford University
relevant_life_stage!
adult
Showing 1 of 1 results
table-tab-icon
matrix-icon
Download
FileSet
DSR042SCF
released
Annotation file set
: Accessible chromatin annotation for Breast Breast epithelium from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP