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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
2
target gene predictions
Annotation Category
2
Target gene links
2
cis-regulatory elements
Annotation type Category
4
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
41
heart
39
stomach
36
A549
33
brain
33
lung
32
muscle of arm
30
small intestine
29
adrenal gland
28
placenta
26
common myeloid progenitor, CD34-positive
26
large intestine
26
left lung
26
muscle of back
26
muscle of leg
22
right lung
22
thymus
21
hematopoietic multipotent progenitor cell
18
B cell
18
CD4-positive, alpha-beta memory T cell
16
liver
15
adipose tissue
15
monocyte
15
neural progenitor cell
14
CD8-positive, alpha-beta memory T cell
14
spinal cord
13
T-helper 1 cell
13
T-helper 17 cell
13
islet of Langerhans
13
regulatory T cell
13
spleen
12
K562
12
hepatocyte
12
mononuclear cell
11
cardiomyocytes
11
heart left ventricle
10
H1-hESC
10
MCF-7
10
body of pancreas
10
endothelial cell
10
sigmoid colon
10
trophoblast cell
9
T-helper 2 cell
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
ovary
9
pancreatic ductal cell
9
progenitor cell of endocrine pancreas
8
CD14-positive monocyte
8
EndoC_BH1
8
T cell
8
chorionic villus
8
endocrine pancreas
8
foreskin keratinocyte
8
gastrocnemius medialis
8
muscle of trunk
8
natural killer cell
8
psoas muscle
8
thyroid gland
8
tibial nerve
8
transverse colon
7
caudate nucleus
7
heart right ventricle
7
retina
7
skeletal muscle tissue
7
testis
6
HeLa-S3
6
Peyer's patch
6
adipocyte
6
cerebellum
6
chorion membrane
6
endometrium adenocarcinoma
6
fibroblast of cardiac tissue
6
fibroblast of dermis
6
fibroblast of lung
6
frontal cortex
6
immortal human breast epithelial cell line cell
6
layer of hippocampus
6
mammary gland epithelial cell
6
naive T cell
6
neurosphere
6
omental fat pad
6
pancreatic acinar cell
6
pancreatic alpha cell
6
pancreatic beta cell
6
pancreatic delta cell
6
right atrium auricular region
6
upper lobe of left lung
5
aorta
5
ascending aorta
5
coronary artery
5
mesangial cell
5
mesenchymal stem cell
5
pancreatic stellate cell
5
skeletal muscle myoblast
5
subcutaneous adipose tissue
5
substantia nigra
5
temporal lobe
5
tibial artery
5
vagina
4
22Rv1
4
Brodmann (1909) area 46
4
LNCaP clone FGC
4
NAMALWA cell
4
SK-N-DZ
4
SK-N-SH
4
T47D
4
angular gyrus
4
bone tissue
4
breast epithelium
4
bronchial epithelial cell
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
cingulate gyrus
4
colonic mucosa
4
dermis blood vessel endothelial cell
4
dermis lymphatic vessel endothelial cell
4
duodenal mucosa
4
endodermal cell
4
endothelial cell of umbilical vein
4
epithelial cell of prostate
4
esophagus
4
esophagus muscularis mucosa
4
esophagus squamous epithelium
4
eye
4
fibroblast of breast
4
foreskin fibroblast
4
gamma-delta T cell
4
keratinocyte
4
limb
4
lower leg skin
4
mucosa of rectum
4
muscle cell
4
muscle layer of colon
4
muscle layer of duodenum
4
myoepithelial cell of mammary gland
4
nephron progenitor
4
neutrophil
4
osteoblast
4
pancreas
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
parathyroid adenoma
4
prostate gland
4
skeletal muscle satellite cell
4
skin fibroblast
4
smooth muscle cell
4
stomach smooth muscle
4
thoracic aorta
4
tongue
4
trophoblast
4
urinary bladder
3
Adaptive / Maladaptive / Repairing Fibroblast
3
Ammon's horn
3
B Cell
3
CD8-positive, alpha-beta T cell
3
Classical Dendritic Cell
3
Connecting Tubule Intercalated Cell Type A
3
Connecting Tubule Principal Cell
3
Cycling Endothelial Cell
3
Cycling Epithelial Cell
3
Cycling Mononuclear Phagocyte
3
Cycling T Cell
3
Cytotoxic T Cell
3
Degenerative Vascular Smooth Muscle Cell
3
Fibroblast
3
Lymphatic Endothelial Cell
3
M2 Macrophage
3
Mast Cell
3
Mesangial Cell
3
Monocyte
3
Monocyte-derived Cell
3
Myofibroblast
3
Natural Killer T Cell
3
Natural Killer T Cell Type 1
3
Natural Killer T Cell Type 2
3
Non-Classical Monocyte
3
Plasma Cell
3
Plasmacytoid Dendritic Cell
3
Regulatory T Cell
3
T Cell
3
Transitional Principal-Intercalated Cell
3
Vascular Smooth Muscle Cell / Pericyte
3
adult endothelial progenitor cell
3
astrocyte
3
central memory CD8-positive, alpha-beta T cell
3
effector memory CD8-positive, alpha-beta T cell
3
hepatic stellate cell
3
hepatocyte(AFP)
3
left cardiac atrium
3
memory B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
neural cell
3
occipital lobe
3
pancreatic quiescent stellate cell
3
putamen
Organ
4
breast
4
epithelium
Life stage
4
adult
Date released
4
September, 2022
Software used
4
r
3
encode-ccres
2
chromhmm
1
abc
1
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
organ_slims!
kidney
Showing 4 of 4 results
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Download
FileSet
DSR592FRB
released
Annotation file set
: Candidate regulatory elements for BSS00146 breast epithelium from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR385CMS
released
Annotation file set
: Candidate regulatory elements for BSS00145 breast epithelium from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR572SDG
released
Annotation file set
: Target gene predictions for BSS00146 breast epithelium from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR097ZWH
released
Annotation file set
: Target gene predictions for BSS00145 breast epithelium from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP