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Schema
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Annotation type
1
accessible chromatin
1
target gene predictions
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
1
ATAC-seq
1
snATAC-seq
Available data
2
bed bed3+
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
110
heart
44
heart left ventricle
29
heart right ventricle
23
coronary artery
21
right atrium auricular region
18
endocardial cell
17
fibroblast of cardiac tissue
16
fibroblast
14
left cardiac atrium
12
cardiac muscle cell
12
macrophage
11
right cardiac atrium
10
endothelial cell
10
endothelial cell of lymphatic vessel
10
natural killer cell
10
pericyte
9
B cell
9
smooth muscle cell
8
adipocyte
8
neuron
8
regular ventricular cardiac myocyte
7
T cell
7
cardiac fibroblast
7
dendritic cell
7
smooth muscle cell of the coronary artery
6
mast cell
6
mesothelial cell of epicardium
5
left ventricle myocardium
4
regular atrial cardiac myocyte
2
cardiac endothelial cell
2
cardiac muscle myoblast
2
endothelial cell of coronary artery
2
mesothelial cell(epicardial)
2
neuronal stem cell
2
pericyte cell
2
regular ventricular cardiac myocyte(cycling)
2
ventricular cardiac muscle cell
1
Right ventricle myocardium inferior
1
Right ventricle myocardium superior
1
aortic valve
1
cardiac atrium fibroblast
1
cardiac myoblast
1
cardiac septum
1
cardiac ventricle
1
cardiac ventricle fibroblast
1
fetal heart
1
left ventricle myocardium inferior
1
left ventricle myocardium superior
1
mitral valve
1
pulmonary valve
1
tricuspid valve
Organ
2
epithelium
2
heart
Date released
2
November, 2021
Software used
1
abc
1
macs
Lab
2
Bing Ren, UCSD
Project
2
ENCODE
Collection Tags
2
AMP
2
T2DKP
RFA
2
ENCODE3
Showing 2 of 2 results
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Download
FileSet
DSR342UQG
released
Annotation file set
: Target gene predictions of Endothelial Cell (Myocardial) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR796CHH
released
Annotation file set
: Accessible chromatin annotation of Endothelial Cell (Myocardial) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE