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Citing CMDGA
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Annotation type
3
candidate regulatory elements
1
gene expression
Annotation Category
3
cis-regulatory elements
1
Gene expression levels
Annotation type Category
3
ChIP-seq
3
DNase-seq
1
RNA-seq
Available data
3
bed bed3+
1
tsv
File set status
4
released
Genome assembly (visualization)
3
hg19
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
in vitro differentiated cells
Biosample term
90
heart
34
heart left ventricle
26
MCF-7
21
coronary artery
19
heart right ventricle
19
right atrium auricular region
17
fibroblast of cardiac tissue
16
mammary gland epithelial cell
12
left cardiac atrium
10
mammary epithelial cell
8
fibroblast of mammary gland
8
myoepithelial cell of mammary gland
8
right cardiac atrium
7
T47D
7
luminal epithelial cell of mammary gland
7
smooth muscle cell of the coronary artery
5
left ventricle myocardium
4
cardiac fibroblast
3
MCF 10A
3
endocardial cell
2
cardiac endothelial cell
2
cardiac muscle myoblast
2
endothelial cell of coronary artery
2
mammary gland
2
ventricular cardiac muscle cell
1
aortic valve
1
cardiac atrium fibroblast
1
cardiac ventricle
1
cardiac ventricle fibroblast
1
fetal heart
1
mitral valve
1
pulmonary valve
1
tricuspid valve
Organ
5
connective tissue
4
heart
1
brain
1
vasculature
0
mammary gland
Life stage
1
adult
1
embryonic
1
unknown
Date released
3
February, 2021
1
May, 2021
Software used
3
encode-ccres
1
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
files.file_type!
bigBed narrowPeak
month_released!
April, 2020
Showing 4 of 4 results
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FileSet
DSR297QYL
released
Annotation file set
: Gene expression annotation of fibroblast ISL1-Lineage marker- on day 10 from embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR892JZJ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE cardiac fibroblast
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR336NCR
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE cardiac fibroblast
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR656QGJ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE cardiac fibroblast
Lab:
AMP-T2D consortium
Project:
AMP