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Schema
Citing CMDGA
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Annotation type
3
candidate regulatory elements
1
binding sites
1
gene expression
Annotation Category
4
cis-regulatory elements
1
Gene expression levels
Annotation type Category
4
ChIP-seq
3
DNase-seq
1
RNA-seq
Available data
4
bed bed3+
1
tsv
File set status
5
released
Genome assembly (visualization)
4
hg19
Organism
5
Homo sapiens
Biosample type
4
primary cell
1
in vitro differentiated cells
Biosample term
90
heart
34
heart left ventricle
21
coronary artery
19
endothelial cell of umbilical vein
19
heart right ventricle
19
right atrium auricular region
19
tibial artery
17
fibroblast of cardiac tissue
16
ascending aorta
16
endothelial cell of hepatic sinusoid
13
aorta
12
left cardiac atrium
11
thoracic aorta
10
choroid plexus epithelial cell
10
dermis blood vessel endothelial cell
8
dermis lymphatic vessel endothelial cell
8
fibroblast of pulmonary artery
8
right cardiac atrium
7
pulmonary artery endothelial cell
7
smooth muscle cell of the coronary artery
6
smooth muscle cell of the brain vasculature
5
cardiac fibroblast
5
Afferent / Efferent Arteriole Endothelial Cell
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Glomerular Capillary Endothelial Cell
5
Lymphatic Endothelial Cell
5
Peritubular Capillary Endothelial Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
brain microvascular endothelial cell
5
cardiac fibroblast
5
fibroblast of the aortic adventitia
5
kidney capillary endothelial cell
5
left ventricle myocardium
5
lung microvascular endothelial cell
4
aortic endothelial cell
4
dermis microvascular lymphatic vessel endothelial cell
4
endothelial cell of lymphatic vessel
4
pancreatic endothelial cell
4
vascular associated smooth muscle cell
3
endocardial cell
2
capillary endothelial cell
2
cardiac endothelial cell
2
cardiac muscle myoblast
2
endothelial cell of coronary artery
2
vein endothelial cell
2
ventricular cardiac muscle cell
1
brain microvascular endothelial cell
1
abdominal aorta artery
1
aorta wall
1
aortic smooth muscle cell
1
aortic valve
1
cardiac atrium fibroblast
1
cardiac ventricle
1
cardiac ventricle fibroblast
1
circle of Willis
1
fetal heart
1
mitral valve
1
placental villus capillary endothelial cell
1
pulmonary valve
1
tricuspid valve
1
whole blood
Organ
5
connective tissue
4
heart
1
brain
1
vasculature
0
blood vessel
Life stage
1
adult
1
embryonic
1
unknown
Date released
3
February, 2021
1
May, 2021
1
October, 2022
Software used
3
encode-ccres
1
chromhmm
1
r
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
month_released!
August, 2017
Showing 5 of 5 results
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Download
FileSet
DSR153VPT
released
Annotation file set
: Binding sites annotation for cardiac fibroblast (HCFaa) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR297QYL
released
Annotation file set
: Gene expression annotation of fibroblast ISL1-Lineage marker- on day 10 from embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR892JZJ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE cardiac fibroblast
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR336NCR
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE cardiac fibroblast
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR656QGJ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE cardiac fibroblast
Lab:
AMP-T2D consortium
Project:
AMP