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Schema
Citing CMDGA
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Annotation type
3
target gene predictions
1
gene expression
Annotation Category
3
Target gene links
1
Gene expression levels
Annotation type Category
2
HiC
1
RNA-seq
1
pCHi-C
Available data
3
bed bed3+
1
tsv
File set status
4
released
Genome assembly (visualization)
3
hg19
Organism
4
Homo sapiens
Biosample type
4
in vitro differentiated cells
Biosample term
5
islet of Langerhans
4
adipocyte
4
cardiomyocytes (cardiac muscle cell)
4
hepatocyte
4
liver
4
subcutaneous adipose tissue
3
C1 segment of cervical spinal cord
3
ascending aorta
3
body of pancreas
3
coronary artery
3
gastrocnemius medialis(Muscle - Skeletal)
3
left ventricle myocardium
3
omental fat pad
3
pancreas
3
psoas muscle
3
right atrium auricular region
3
right lobe of liver
3
tibial artery
3
tibial nerve
2
ESC derived cell line
2
HepG2
2
aorta
2
cardiac precursors (cardiac muscle cell)
2
endothelial cell of umbilical vein
2
heart left ventricle
2
heart right ventricle
1
B-lymphoblastoid cell line
1
CD34-PB
1
EndoC_BH1
1
GM12878
1
H1-hESC
1
K562
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
adipose tissue
1
adrenal gland
1
bladder (urinary bladder)
1
colonic mucosa
1
duodenal mucosa
1
embryonic stem cell
1
esophagus
1
fibroblast cell line
1
fibroblast of lung
1
gastric (mucosa of stomach)
1
heart
1
keratinocyte
1
lung
1
lymphocyte of B lineage (iPSC)
1
mammary epithelial cell
1
mesenchymal stem cell
1
mesendoderm
1
mucosa of rectum
1
neural progenitor cell
1
ovary
1
rectum smooth muscle tissue
1
right cardiac atrium
1
sigmoid colon
1
skeletal muscle
1
skeletal muscle myoblast
1
small intestine
1
spleen
1
stomach smooth muscle
1
subcutaneous abdominal adipose tissue
1
thymus
1
trophoblast
1
white adipose cell
Life stage
2
adult
1
unknown
Date released
4
March, 2020
2
February, 2021
1
May, 2020
1
May, 2021
0
August, 2017
Software used
2
hiccups
1
chicago
1
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
organ_slims!
brain
Showing 4 of 4 results
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Download
FileSet
DSR804DQM
released
Annotation file set
: A target gene prediction annotation in cardiomyocytes (cardiac muscle cell) of DSR722REK Hi-C E-MTAB-6014
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR453PFX
released
Annotation file set
: A target gene prediction annotation in cardiomyocytes (cardiac muscle cell) of DSR235SPD Hi-C
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR854NSN
released
Annotation file set
: A target gene prediction annotation in cardiomyocytes (cardiac muscle cell) of DSR382TEU pCHi-C E-MTAB-6014
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR259JVL
released
Annotation file set
: Gene expression levels of cardiomyocytes (cardiac muscle cell) from RNA-seq (GSE106690 and E-MTAB-6013)
Lab:
AMP-T2D consortium
Project:
AMP