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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
gene expression
Annotation Category
1
Gene expression levels
1
cis-regulatory elements
Annotation type Category
1
DNase-seq
1
RNA-seq
Available data
1
bed bed3+
1
bigWig
1
tsv
File set status
2
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
51
HeLa-S3
37
H1-hESC
19
HFFc6
16
K562
14
endothelial cell of hepatic sinusoid
12
hepatocyte
9
extended pluripotent stem (EPS) cells
9
progenitor cell of endocrine pancreas
7
pancreatic ductal cell
6
GM12878
6
H9
6
endothelial cell
6
fibroblast
6
left cardiac atrium
6
lymphocyte
6
olfactory receptor cell
6
skeletal muscle fiber
5
T-helper 1 cell
5
regulatory T cell
5
smooth muscle cell
4
CyT49
4
HUES8
4
T-helper 17 cell
4
adipocyte
4
iPSC derived cell line
3
cardiac fibroblast
3
Schwann cell
3
cardiac muscle cell
3
enterocyte
3
hepatocyte(AFP)
3
macrophage
3
mesenchymal stem cell
3
myofibroblast cell
3
pancreatic acinar cell
3
type I muscle cell
3
type II muscle cell
2
Ammon's horn
2
HCT116
2
SGBS preadipocytes
2
T cell
2
adipose-derived stem cell
2
aorta
2
basal cell
2
brain
2
caudate nucleus
2
coronary artery
2
differentiating adipose-derived stem cell
2
endothelial cell of umbilical vein
2
epithelial cell of esophagus
2
frontal cortex
2
glial cell
2
goblet cell
2
heart
2
heart left ventricle
2
islet of Langerhans
2
kidney
2
leukocyte
2
neural cell
2
omental fat pad
2
pancreas
2
pancreatic beta cell
2
pancreatic delta cell
2
pancreatic polypeptide-secreting cell
2
pancreatic stellate cell
2
putamen
2
right atrium auricular region
2
skeletal muscle satellite cell
2
subcutaneous adipose tissue
2
tibial artery
2
vascular associated smooth muscle cell
1
hindlimb muscle
1
B cell
1
B-1a B cell
1
C1 segment of cervical spinal cord
1
CD4-positive helper T cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
GM18486
1
GM18505
1
GM18507
1
GM18508
1
GM18516
1
GM18522
1
GM19099
1
GM19141
1
GM19193
1
GM19204
1
GM19238
1
GM19239
1
GM19240
1
Satellite Cells, Skeletal Muscle
1
T-helper 2 cell
1
adipose tissue
1
amygdala
1
anterior cingulate cortex
1
aorta wall
1
ascending aorta
1
astrocyte
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
body of pancreas
1
brain microvascular endothelial cell
1
brain pericyte
1
bronchial goblet cell
1
central memory CD4-positive, alpha-beta T cell
1
central memory CD8-positive, alpha-beta T cell
1
cerebellar cortex
1
cerebellum
1
cerebellum (Hemisphere)
1
choroid plexus epithelial cell
1
cortical cell of adrenal gland
1
effector memory CD4-positive, alpha-beta T cell
1
effector memory CD8-positive, alpha-beta T cell
1
epithelial cell of proximal tubule
1
excitatory neuron
1
fetal heart
1
forelimb muscle
1
globus pallidus
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
granulosa cell
1
heart right ventricle
1
hepatic stellate cell
1
hippocampal neuron
1
hypothalamus
1
keratinocyte
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
large intestine
1
left renal pelvis
1
liver
1
lower motor neuron
1
luminal epithelial cell of prostatic duct
1
lymphocyte of B lineage
1
mammary gland epithelial cell
1
mast cell
1
memory B cell
1
mesothelial cell
1
middle frontal gyrus
1
muscle of arm
1
muscle of leg
1
naive B cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
nephron tubule
1
nucleus accumbens
1
occipital lobe
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic alpha cell
1
pancreatic endocrine cell
1
pancreatic endothelial cell
1
pancreatic immune cell
1
parietal cell
1
peptic cell
1
pigmented layer of retina
1
pons
1
preadipocyte
1
renal cortex interstitium
1
renal cortical epithelial cell
1
renal pelvis
1
retina
1
retinal pigment epithelial cell
1
right cardiac atrium
1
right lobe of liver
1
right renal pelvis
1
skeletal muscle
1
skeletal muscle cell
1
smooth muscle cell of the brain vasculature
1
substantia nigra
1
superior temporal gyrus
1
thyroid follicular cell
1
tibial nerve
1
tissue-resident macrophage
1
type B pancreatic cell
1
type II pneumocyte
1
visceral abdominal adipose tissue
Organ
2
brain
Life stage
2
adult
Date released
9
September, 2022
3
February, 2021
3
March, 2020
2
January, 2020
1
August, 2017
1
February, 2020
1
January, 2022
1
June, 2020
1
May, 2020
0
February, 2024
Software used
1
macs
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_term_name!
osteosarcoma
Showing 2 of 2 results
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Download
FileSet
DSR253KNV
released
Annotation file set
: Gene expression summary of TPM of brain caudate basal ganglia from GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR775JNR
released
Annotation file set
: Accessible chromatin annotation of brain caudate nucleus from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP