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Annotation type
1
Fine-mapped variants
1
gene expression
Annotation Category
1
Gene expression levels
1
Genetic variant effects
Annotation type Category
1
RNA-seq
1
snRNA-seq
Available data
1
tsv
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
1
primary cell
1
tissue
Biosample term
2
skeletal muscle fiber
1
Ammon's horn
1
C1 segment of cervical spinal cord
1
adipocyte
1
amygdala
1
anterior cingulate cortex
1
ascending aorta
1
body of pancreas
1
caudate nucleus
1
cerebellum
1
cerebellum (Hemisphere)
1
coronary artery
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
endothelial cell
1
frontal cortex
1
gastrocnemius medialis(Muscle - Skeletal)
1
glial cell
1
hypothalamus
1
left ventricle myocardium
1
leukocyte
1
mesenchymal stem cell
1
neural cell
1
nucleus accumbens
1
omental fat pad
1
putamen
1
right atrium auricular region
1
right lobe of liver
1
skeletal muscle satellite cell
1
smooth muscle cell
1
subcutaneous adipose tissue
substantia nigra
1
tibial artery
1
tibial nerve
1
type I muscle cell
1
type II muscle cell
Organ
1
brain
1
epithelium
Life stage
1
adult
Date released
1
February, 2024
1
March, 2020
Software used
22
macs
17
r
6
abc
4
chromhmm
3
deltasvm
3
seurat
2
encode-ccres
2
qTLtools
2
rasqual
1
cicero
1
deeptools
1
eigenmt
1
gtex_eqtl:V8
1
gtex_finemapping_eQTL:caveman
1
gtex_finemapping_eQTL:caviar
1
gtex_finemapping_eQTL:dapg
1
samtools
1
umitools
Lab
1
AMP-T2D consortium
1
Stephen Parker, UMich
Project
2
AMP
RFA
1
AMP
1
AMP2
biosample_term_name!
substantia nigra
Showing 2 of 2 results
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Download
FileSet
DSR251UJD
released
Annotation file set
: Cell type gene expression mean TPM and bw of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR032CRB
released
Annotation file set
: Fine-mapping results from DAPG of caudate nucleus for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP