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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
1
gene expression
Annotation Category
2
cis-regulatory elements
1
Gene expression levels
Annotation type Category
2
DNase-seq
1
RNA-seq
Available data
2
bed bed3+
1
bigWig
1
tsv
File set status
3
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
18
fibroblast
18
pericyte cell
12
excitatory neuron
12
smooth muscle cell
11
macrophage
9
astrocyte
5
B cell
5
T cell
5
erythroblast
5
fibroblast of cardiac tissue
5
inhibitory neuron
4
blood vessel smooth muscle cell
4
enteric smooth muscle cell
4
gabaergic neuron
4
glutamatergic neuron
4
heart
4
pancreas
4
skeletal muscle satellite cell
4
skin fibroblast
4
smooth muscle cell of the esophagus
3
cardiac fibroblast
3
Ammon's horn
3
CD8-positive, alpha-beta T cell
3
SGBS preadipocytes
3
brain
3
caudate nucleus
3
enteric neuron
3
frontal cortex
3
hepatic stellate cell
3
islet of Langerhans
3
kidney
3
oligodendrocyte precursor cell
3
putamen
3
right atrium auricular region
3
schwann cell
3
skeletal muscle fiber
3
stomach
3
tibial artery
2
CD4-positive, alpha-beta T cell
2
Muller cell
2
Rh-4 cell
2
acute myeloid leukemia cell
2
adipocyte
2
alveolar macrophage
2
aorta
2
basal cell
2
bone marrow cell
2
brain pericyte
2
cardiac muscle cell
2
ciliated cell
2
colon goblet cell
2
coronary artery
2
erythroid cell
2
fetal cardiomyocyte
2
globus pallidus
2
heart left ventricle
2
intestinal tuft cell
2
luteal cell
2
mast cell
2
mature NK T cell
2
melanocyte
2
memory B cell
2
mesangial cell
2
microglial cell
2
monocyte
2
muscle of leg
2
naive t cell
2
occipital lobe
2
oligodendrocyte
2
omental fat pad
2
osteoblast
2
plasma cell
2
pons
2
regular atrial cardiac myocyte
2
regulatory T cell
2
renal pelvis
2
retina
2
skeletal muscle fibroblast
2
spinal cord
2
stromal cell
2
superior temporal gyrus
2
tibial nerve
2
type I muscle cell
2
type II muscle cell
2
uterine smooth muscle cell
2
ventricular cardiac muscle cell
1
hindlimb muscle
1
786-O cell
1
A-673 cell
1
A172
1
A549
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
B-Lymphocytes
1
B-lymphocyte
1
BE(2)-C
1
BJ cell
1
C1 segment of cervical spinal cord
1
CD1c-positive myeloid dendritic cell
1
CD4-Positive T-Lymphocytes
1
CD4-positive helper T cell
1
CMK
1
COLO-829 cell
1
COLO205
1
Caco-2 cell
1
Caki2
1
D341 Med cell
1
DG-75 cell
1
Daoy
1
ECC-1
1
G-401 cell
1
GM03348
1
GM04503
1
GM04504
1
GM06990
1
GM10248
1
GM10266
1
GM12864
1
GM12865
1
GM12878
1
GM13976
1
GM13977
1
GM18507
1
GM19240
1
GM20000
1
GM23248
1
GP5d
1
Glioblastoma
1
H1-hESC
1
H4
1
H7-hESC
1
HAC cell
1
HAP-1
1
HBMEC cell
1
HCT-116 cell
1
HEK293
1
HGF
1
HL-60
1
HT-29
1
HUES6
1
HUES8
1
HeLa cell
1
HepG2
1
Hodgkin lymphoma cell line
1
HuH-7
1
HuTu-80 cell
1
IMR-90
1
Ishikawa
1
Jurkat
1
K562
1
KARPAS-422 cell
1
KBM-7
1
Kasumi-1
1
L-1236 cell
1
L-428 cell
1
L1-S8
1
L1-S8R
1
LHCN-M2
1
LNCAP
1
LoVo cell
1
M059J
1
MCF-7
1
MCF10A-Er-Src cell
1
MDA-MB-231 cell
1
MG63
1
MM.1S
1
MOLM-13 cell
1
Myoblasts
1
NAMALWA cell
1
NB-4 cell
1
NCCIT cell
1
NCI-H226 cell
1
NHBE cell
1
NHDF cell
1
NHEK
1
NT2-D1 cell
1
Normal Human Astrocytes
1
OCI-AML3
1
OCI-LY7
1
PA-TU-8988T cell
1
PANC-1 cell
1
PC-3
1
PC-9
1
Peyer's patch
1
RCC 7860
1
REH cell
1
RKO
1
RPMI7951
1
RPMI8226
1
RS4-11 cell
1
RWPE1
1
Rh-5 cell
1
Rhabdomyosarcoma
1
SAEC
1
SJCRH30
Organ
3
brain
Life stage
2
adult
Date released
9
September, 2022
3
February, 2021
3
March, 2020
2
January, 2020
1
August, 2017
1
February, 2020
1
January, 2022
1
June, 2020
1
May, 2020
0
November, 2021
Software used
2
macs
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
organ_slims!
epithelium
Showing 3 of 3 results
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Download
FileSet
DSR569LZX
released
Annotation file set
: Accessible chromatin annotation for Neural Caudate Nucleus from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR253KNV
released
Annotation file set
: Gene expression summary of TPM of brain caudate basal ganglia from GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR775JNR
released
Annotation file set
: Accessible chromatin annotation of brain caudate nucleus from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP