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Schema
Citing CMDGA
Clear Filters
Annotation type
1
chromatin state
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
Available data
bed bed3+
1
bed bed9
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
tissue
Biosample term
28
islet of Langerhans
23
heart
22
kidney
21
brain
21
stomach
18
lung
17
liver
16
adrenal gland
16
muscle of arm
15
muscle of leg
15
placenta
14
subcutaneous adipose tissue
13
left lung
13
muscle of back
12
adipose tissue
11
right kidney
11
right lung
11
thymus
11
tibial nerve
10
body of pancreas
10
caudate nucleus
9
cerebellum
9
coronary artery
9
frontal cortex
9
left kidney
9
omental fat pad
9
putamen
9
renal cortex interstitium
9
renal pelvis
9
right atrium auricular region
9
substantia nigra
9
tibial artery
8
ascending aorta
8
heart left ventricle
8
spinal cord
8
spleen
6
Ammon's horn
6
amygdala
6
anterior cingulate cortex
6
hypothalamus
6
nucleus accumbens
6
ovary
6
right lobe of liver
6
skeletal muscle tissue
5
C1 segment of cervical spinal cord
5
aorta
5
cerebellum (Hemisphere)
5
gastrocnemius medialis(Muscle - Skeletal)
5
left ventricle myocardium
5
retina
5
temporal lobe
5
testis
5
thyroid gland
4
angular gyrus
4
bone tissue
4
chorionic villus
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endocrine pancreas
4
gastrocnemius medialis
4
heart right ventricle
4
layer of hippocampus
4
muscle of trunk
4
psoas muscle
4
skin of body
4
vagina
4
visceral abdominal adipose tissue
3
cartilage tissue
3
chorion membrane
3
esophagus
3
esophagus muscularis mucosa
3
left renal cortex interstitium
3
pancreas
3
prostate gland
3
right cardiac atrium
3
right renal cortex interstitium
3
thoracic aorta
3
upper lobe of left lung
3
uterus
2
Brodmann (1909) area 46
2
blood
2
breast epithelium
2
cingulate gyrus
2
dorsolateral prefrontal cortex
2
esophagus squamous epithelium
2
eye
2
germinal matrix
2
globus pallidus
2
left cardiac atrium
2
left renal pelvis
2
limb
2
lower leg skin
2
medulla oblongata
2
midbrain
2
middle frontal gyrus
2
minor salivary gland
2
occipital lobe
2
parathyroid adenoma
2
pons
2
right renal pelvis
2
stomach smooth muscle
2
superior temporal gyrus
2
tongue
2
trophoblast
2
urinary bladder
1
Pancreatic islets
1
abdominal aorta artery
1
amnion
1
aorta wall
1
aortic valve
1
arm bone
1
bladder
1
breast
1
breast - mammary tissue
1
cerebellar cortex
1
cerebellar hemisphere
1
cervix - ectocervix
1
cervix - endocervix
1
cortex
1
cortex of kidney
1
diencephalon
1
embryonic facial prominence
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
esophagus mucosa
1
fallopian tube
1
femur
1
gastroesophageal sphincter
1
germinal center
1
inferior parietal cortex
1
kidney - cortex
1
kidney - medulla
1
leg bone
1
metanephros
1
mitral valve
1
mucosa of stomach
1
parietal lobe
1
pituitary
1
pituitary gland
1
prostate
1
pulmonary valve
1
renal glomerulus
1
skeletal muscle
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
1
synovial joint
1
thyroid
1
tricuspid valve
1
umbilical cord
1
whole blood
Organ
1
brain
Life stage
1
adult
Date released
1
September, 2022
Software used
1
chromhmm
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
files.file_type!
bed bed3+
month_released!
April, 2019
organ_slims!
intestine
Showing 1 of 1 results
table-tab-icon
matrix-icon
Download
FileSet
DSR323JTR
released
Annotation file set
: Chromatin states for BSS00201 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP