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Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
1
bigWig
1
tsv
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
113
monocyte
66
heart
66
stomach
61
HeLa-S3
58
kidney
54
brain
51
lung
51
muscle of arm
48
small intestine
47
CD8-positive, alpha-beta T cell
47
adrenal gland
46
placenta
45
H1-hESC
44
A549
43
large intestine
43
muscle of leg
41
common myeloid progenitor, CD34-positive
41
muscle of back
39
left lung
39
neural progenitor cell
37
B cell
37
liver
37
thymus
36
retina
35
K562
35
fibroblast
34
endothelial cell
34
right lung
33
macrophage
32
hematopoietic multipotent progenitor cell
31
renal cortex interstitium
31
renal pelvis
31
right kidney
28
islet of Langerhans
28
spinal cord
27
CD14-positive monocyte
27
left kidney
27
spleen
25
adipocyte
25
heart left ventricle
24
smooth muscle cell
23
CD4-positive, alpha-beta memory T cell
23
hepatocyte
23
pericyte cell
22
adipose tissue
21
MCF-7
21
natural killer cell
20
breast cancer cell
20
pigmented layer of retina
19
HFFc6
19
keratinocyte
19
pancreas
18
T cell
18
foreskin keratinocyte
18
regulatory T cell
17
foreskin fibroblast
17
sigmoid colon
17
trophoblast cell
16
HepG2
16
cardiac muscle cell
16
ovary
15
CD8-positive, alpha-beta memory T cell
15
GM12878
15
H9
15
psoas muscle
15
retinal pigment epithelial cell
15
tibial nerve
15
transverse colon
14
astrocyte
14
endothelial cell of umbilical vein
14
gastrocnemius medialis
14
mesenchymal stem cell
14
mononuclear cell
14
pancreatic ductal cell
14
thyroid gland
13
body of pancreas
13
fibroblast of cardiac tissue
13
layer of hippocampus
13
osteoblast
13
testis
13
upper lobe of left lung
12
CD4-positive, alpha-beta T cell
12
EndoC_BH1
12
T-helper 1 cell
12
caudate nucleus
12
coronary artery
12
excitatory neuron
12
fibroblast of lung
12
heart right ventricle
12
lymphoblastoid cell line
12
mammary epithelial cell
12
muscle of trunk
12
neuroblastoma cell
12
neuronal stem cell
12
pancreatic beta cell
12
prostate gland
12
skeletal muscle tissue
11
chorionic villus
11
endothelial cell of hepatic sinusoid
11
mammary gland epithelial cell
11
skeletal muscle myoblast
10
Peyer's patch
10
Rhabdomyosarcoma
10
T-helper 2 cell
10
bronchial epithelial cell
10
embryonic stem cell
10
endocrine pancreas
10
gastric cancer cell
10
pancreatic acinar cell
10
pancreatic alpha cell
10
right atrium auricular region
10
right renal pelvis
9
T-helper 17 cell
9
diffuse intrinsic pontine glioma
9
epithelial cell of prostate
9
erythroblast
9
fibroblast of dermis
9
left renal cortex interstitium
9
left renal pelvis
9
liposarcoma
9
lymphocyte
9
neurosphere
9
pancreatic delta cell
9
skeletal muscle satellite cell
9
skin fibroblast
9
subcutaneous adipose tissue
9
tibial artery
8
22Rv1
8
B-lymphoblastoid cell line
8
HEK293
8
breast epithelium
8
choroid plexus epithelial cell
8
esophagus
8
fibroblast cell line
8
left cardiac atrium
8
naive thymus-derived CD4-positive, alpha-beta T cell
8
neutrophil
8
pituitary stalk
8
substantia nigra
8
temporal lobe
8
trophoblast
7
CD4-positive helper T cell
7
GM06990
7
GM12864
7
GM12865
7
GM19240
7
HAP-1
7
HT-29
7
IMR-90
7
Jurkat
7
aorta
7
colonic mucosa
7
esophageal adenocarcinoma
7
esophagus muscularis mucosa
7
esophagus squamous epithelium
7
hepatic stellate cell
7
kidney tubule cell
7
lower leg skin
7
mast cell
7
mesendoderm
7
omental fat pad
7
putamen
7
thoracic aorta
6
AG04449 cell
6
AG04450 cell
6
AG09309 cell
6
AG09319 cell
6
AG10803 cell
6
Ammon's horn
6
BE(2)-C
6
BJ cell
6
CD1c-positive myeloid dendritic cell
6
CMK
6
Caco-2 cell
6
Chondroid Chordoma
6
GM12875
6
GM19238
6
GM19239
6
GM23248
6
HUES8
6
LNCAP
6
NAMALWA cell
6
SK-N-MC
6
ascending aorta
6
chondrocyte
6
cingulate gyrus
6
colon epithelial cell
6
endometrium adenocarcinoma
6
eye
6
fibroblast of pulmonary artery
6
frontal cortex
6
hESC cell
6
iPSC derived cell line
6
immortal human breast epithelial cell line cell
6
neuroblastoma cell line
6
parathyroid adenoma
6
tongue
6
uterus
5
cardiac fibroblast
5
CyT49
Organ
1
epithelium
Date released
1
November, 2021
Software used
1
macs
Lab
1
Bing Ren, UCSD
Project
1
ENCODE
Collection Tags
1
AMP
1
T2DKP
RFA
1
ENCODE3
Showing 1 of 1 results
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Download
FileSet
DSR812RPT
released
Annotation file set
: Accessible chromatin annotation of Fetal Cholangiocytes from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE