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Schema
Citing CMDGA
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Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
ATAC-seq
1
DNase-seq
1
H3K27ac ChIP-Seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
85
heart
73
brain
72
kidney
67
muscle of arm
64
stomach
62
lung
60
placenta
58
muscle of leg
56
large intestine
55
small intestine
54
muscle of back
53
HeLa-S3
52
left lung
51
neural progenitor cell
48
thymus
46
H1-hESC
45
right lung
42
right kidney
40
renal cortex interstitium
40
renal pelvis
37
adrenal gland
36
left kidney
35
spinal cord
31
CD8-positive, alpha-beta T cell
31
endothelial cell
30
fibroblast
29
macrophage
29
monocyte
28
islet of Langerhans
23
EndoC_BH1
23
liver
23
smooth muscle cell
23
trophoblast cell
22
K562
22
foreskin keratinocyte
20
breast cancer cell
20
pancreatic ductal cell
19
HFFc6
19
endothelial cell of umbilical vein
19
foreskin fibroblast
19
heart left ventricle
19
pericyte cell
18
adipocyte
18
embryonic stem cell
17
muscle of trunk
17
retina
16
H9
16
HepG2
16
cardiac muscle cell
16
chorionic villus
16
hepatocyte
16
induced pluripotent stem cell
15
CD14-positive monocyte
14
B cell
14
heart right ventricle
14
keratinocyte
14
pancreatic acinar cell
astrocyte
13
mesenchymal stem cell
13
neurosphere
13
spleen
12
excitatory neuron
12
left renal cortex interstitium
12
lymphoblastoid cell line
12
neuroblastoma cell
12
pancreatic beta cell
12
regulatory T cell
12
retinal pigment epithelial cell
11
GM12878
11
erythroblast
11
left cardiac atrium
11
left renal pelvis
11
right renal pelvis
10
Rhabdomyosarcoma
10
SK-N-SH
10
T cell
10
fibroblast of cardiac tissue
10
gastric cancer cell
10
lymphocyte
10
neuronal stem cell
10
pancreatic delta cell
10
right renal cortex interstitium
10
skin fibroblast
10
trophoblast
9
HEK293
9
IMR-90
9
NAMALWA cell
9
SK-N-DZ
9
cardiomyocytes
9
diffuse intrinsic pontine glioma
9
liposarcoma
9
pancreatic alpha cell
9
tongue
8
B-lymphoblastoid cell line
8
SK-N-MC
8
endodermal cell
8
fibroblast cell line
8
limb
8
mammary epithelial cell
8
mesendoderm
8
ovary
8
pancreatic stellate cell
8
pituitary stalk
8
skeletal muscle fiber
8
testis
7
AG04449 cell
7
AG04450 cell
7
BE(2)-C
7
BJ cell
7
CD4-positive helper T cell
7
CMK
7
Jurkat
7
MCF-7
7
MG63
7
WERI-Rb-1
7
esophageal adenocarcinoma
7
eye
7
foreskin melanocyte
7
memory B cell
7
natural killer cell
7
osteoblast
7
pancreas
6
Chondroid Chordoma
6
Daoy
6
GM18507
6
H7-hESC
6
HUES6
6
HUES8
6
SGBS preadipocytes
6
chondrocyte
6
glomerular visceral epithelial cell
6
hESC cell
6
iPSC derived cell line
6
mammary gland epithelial cell
6
mesodermal cell
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
neuroblastoma cell line
6
psoas muscle
6
skeletal muscle myoblast
6
skeletal muscle satellite cell
5
A549
5
A673
5
CyT49
Ewing sarcoma
5
GM08714
5
GM19240
5
HCT-116 cell
5
HUES64
5
Rh-4 cell
5
T-helper 1 cell
5
acute myeloid leukemia
5
adipose tissue
5
coronary artery
5
enterocyte
5
neural cell
5
osteosarcoma
5
prostate cancer cell line
5
sigmoid colon
5
skin of body
5
type I muscle cell
5
umbilical cord
4
AG09309 cell
4
AG09319 cell
4
AG10803 cell
4
B-lymphocyte
4
CD4-positive, alpha-beta T cell
4
COLO205
4
Caco-2 cell
4
DND-41
4
EH
4
EL
4
ELF-1
4
ELR
4
G401
4
GM03348
4
GM06990
4
GM12864
4
GM12865
4
GM18505
4
GM19099
4
GM19193
4
GM19238
4
GM19239
4
HAC cell
4
HAP-1
4
HBMEC cell
4
HL-60
4
HS-SY-2 cell
4
HT-29
4
HUES48
4
KARPAS-422 cell
4
LNCAP
4
LoVo cell
4
MDA-MB-231 cell
4
MM.1S
4
Mantle cell lymphoma
4
NCCIT cell
4
NHEK
4
OCI-LY7
4
PANC-1 cell
Life stage
adult
unknown
Date released
1
May, 2021
Software used
1
abc
Lab
1
Jesse Engreitz, Stanford University
Project
1
AMP
RFA
1
AMP
biosample_term_name!
Ewing sarcoma
astrocyte
relevant_life_stage!
adult
unknown
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR199UUA
released
Annotation file set
: enhancer-gene predicton of CD34-positive_mobilized-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP