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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
2
target gene predictions
1
gene expression
Annotation Category
2
Target gene links
2
cis-regulatory elements
1
Gene expression levels
Annotation type Category
4
ChIP-seq
4
DNase-seq
1
RNA-seq
Available data
4
bed bed3+
1
tsv
File set status
5
released
Genome assembly (visualization)
4
hg19
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
40
heart
39
stomach
36
A549
35
kidney
33
lung
32
brain
32
muscle of arm
30
small intestine
29
adrenal gland
28
placenta
26
common myeloid progenitor, CD34-positive
26
large intestine
26
left lung
26
muscle of back
26
muscle of leg
22
right lung
22
thymus
21
hematopoietic multipotent progenitor cell
20
right kidney
18
B cell
18
CD4-positive, alpha-beta memory T cell
18
left kidney
18
renal cortex interstitium
18
renal pelvis
17
epithelial cell of proximal tubule
15
adipose tissue
15
glomerular endothelial cell
15
liver
15
monocyte
15
neural progenitor cell
14
CD8-positive, alpha-beta memory T cell
14
spinal cord
13
T-helper 1 cell
13
T-helper 17 cell
13
islet of Langerhans
13
regulatory T cell
13
spleen
12
K562
12
hepatocyte
12
mononuclear cell
11
cardiomyocytes
10
H1-hESC
10
MCF-7
10
endothelial cell
10
heart left ventricle
10
sigmoid colon
10
trophoblast cell
9
T-helper 2 cell
9
body of pancreas
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
ovary
9
pancreatic ductal cell
9
progenitor cell of endocrine pancreas
8
CD14-positive monocyte
8
EndoC_BH1
8
T cell
8
chorionic villus
8
endocrine pancreas
8
foreskin keratinocyte
8
gastrocnemius medialis
8
muscle of trunk
8
natural killer cell
8
psoas muscle
8
thyroid gland
8
transverse colon
7
caudate nucleus
7
heart right ventricle
7
kidney loop of Henle thin ascending limb epithelial cell
7
testis
6
HeLa-S3
6
Peyer's patch
6
adipocyte
6
chorion membrane
6
endometrium adenocarcinoma
6
fibroblast of cardiac tissue
6
fibroblast of dermis
6
fibroblast of lung
6
glomerular visceral epithelial cell
6
immortal human breast epithelial cell line cell
6
kidney interstitial cell
6
layer of hippocampus
6
mammary gland epithelial cell
6
naive T cell
6
neurosphere
6
pancreatic acinar cell
6
pancreatic alpha cell
6
pancreatic beta cell
6
pancreatic delta cell
6
retina
6
skeletal muscle tissue
6
tibial nerve
6
upper lobe of left lung
5
aorta
5
ascending aorta
5
coronary artery
5
frontal cortex
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
mesenchymal stem cell
5
omental fat pad
5
pancreatic stellate cell
5
right atrium auricular region
5
substantia nigra
5
tibial artery
5
vagina
4
22Rv1
4
Brodmann (1909) area 46
4
LNCaP clone FGC
4
NAMALWA cell
4
SK-N-DZ
4
SK-N-SH
4
T47D
4
angular gyrus
4
bone tissue
4
breast epithelium
4
bronchial epithelial cell
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
cerebellum
4
cingulate gyrus
4
colonic mucosa
4
dermis blood vessel endothelial cell
4
dermis lymphatic vessel endothelial cell
4
duodenal mucosa
4
endodermal cell
4
endothelial cell of umbilical vein
4
epithelial cell of prostate
4
esophagus
4
esophagus muscularis mucosa
4
esophagus squamous epithelium
4
eye
4
fibroblast of breast
foreskin fibroblast
4
gamma-delta T cell
4
keratinocyte
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
kidney tubule cell
4
left renal cortex interstitium
4
left renal pelvis
4
limb
4
lower leg skin
4
mesangial cell
4
mucosa of rectum
4
muscle cell
4
muscle layer of colon
4
muscle layer of duodenum
4
myoepithelial cell of mammary gland
4
nephron progenitor
4
neutrophil
4
osteoblast
4
pancreas
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
parathyroid adenoma
4
prostate gland
4
right renal cortex interstitium
4
right renal pelvis
4
skeletal muscle myoblast
4
skin fibroblast
4
smooth muscle cell
4
stomach smooth muscle
4
subcutaneous adipose tissue
4
temporal lobe
4
thoracic aorta
4
tongue
4
trophoblast
4
urinary bladder
3
Adaptive / Maladaptive / Repairing Fibroblast
3
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
Afferent / Efferent Arteriole Endothelial Cell
3
Ammon's horn
3
B Cell
3
CD8-positive, alpha-beta T cell
3
Classical Dendritic Cell
3
Connecting Tubule Cell
3
Connecting Tubule Intercalated Cell Type A
3
Connecting Tubule Principal Cell
3
Cortical Thick Ascending Limb Cell
3
Cycling Endothelial Cell
3
Cycling Epithelial Cell
3
Cycling Mononuclear Phagocyte
3
Cycling T Cell
3
Cytotoxic T Cell
3
Degenerative Connecting Tubule Cell
3
Degenerative Connecting Tubule Cell / Principal Cell
3
Degenerative Cortical Thick Ascending Limb Cell
3
Degenerative Distal Convoluted Tubule Cell
3
Degenerative Intercalated Cell Type A
3
Degenerative Peritubular Capillary Endothelial Cell
3
Degenerative Principal Cell
3
Degenerative Proximal Tubule Epithelial Cell
Organ
5
artery
5
blood vessel
5
heart
5
vasculature
Life stage
5
adult
Date released
4
September, 2022
1
January, 2020
Software used
5
r
3
chromhmm
3
macs
2
deltasvm
1
abc
1
encode-ccres
1
gtex_finemapping_eQTL:caveman
1
gtex_finemapping_eQTL:caviar
1
gtex_finemapping_eQTL:dapg
1
qTLtools
1
rasqual
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
biosample_term_name!
foreskin fibroblast
month_released!
February, 2020
Showing 5 of 5 results
table-tab-icon
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Download
FileSet
DSR010DRV
released
Annotation file set
: Candidate regulatory elements for BSS00243 coronary artery from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR401LNJ
released
Annotation file set
: Candidate regulatory elements for BSS00242 coronary artery from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR422SRD
released
Annotation file set
: Target gene predictions for BSS00243 coronary artery from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR035MSO
released
Annotation file set
: Target gene predictions for BSS00242 coronary artery from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR751CKJ
released
Annotation file set
: Gene expression summary of TPM of coronary artery from GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP