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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
eQTL
Annotation Category
1
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
1
DNase-seq
1
RNA-seq
Available data
1
bed bed3+
File set status
2
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
0
primary cell
Biosample term
127
monocyte
69
heart
64
stomach
56
brain
56
kidney
51
lung
50
muscle of arm
49
small intestine
48
adrenal gland
45
placenta
44
muscle of leg
43
CD8-positive, alpha-beta T cell
41
large intestine
40
common myeloid progenitor, CD34-positive
40
liver
39
left lung
39
muscle of back
38
B cell
37
thymus
36
endothelial cell
36
islet of Langerhans
35
retina
34
right lung
32
fibroblast
32
right kidney
31
macrophage
30
renal pelvis
29
hepatocyte
29
renal cortex interstitium
27
CD14-positive monocyte
27
CD4-positive, alpha-beta memory T cell
27
adipose tissue
27
heart left ventricle
27
left kidney
24
pericyte cell
24
regulatory T cell
24
spinal cord
24
spleen
22
T cell
22
smooth muscle cell
22
tibial nerve
21
CD8-positive, alpha-beta memory T cell
20
T-helper 1 cell
20
body of pancreas
20
coronary artery
20
pigmented layer of retina
19
T-helper 17 cell
19
caudate nucleus
19
natural killer cell
18
mononuclear cell
18
pancreatic ductal cell
18
right atrium auricular region
18
sigmoid colon
18
tibial artery
17
ovary
17
pancreas
17
pancreatic acinar cell
17
pancreatic beta cell
17
psoas muscle
16
endothelial cell of hepatic sinusoid
16
frontal cortex
16
heart right ventricle
16
pancreatic delta cell
15
T-helper 2 cell
15
astrocyte
15
endothelial cell of umbilical vein
15
omental fat pad
15
pancreatic alpha cell
15
subcutaneous adipose tissue
15
thyroid gland
15
transverse colon
14
cerebellum
14
gastrocnemius medialis
14
substantia nigra
14
trophoblast cell
13
ascending aorta
13
fibroblast of lung
13
keratinocyte
13
muscle of trunk
13
neutrophil
12
chorionic villus
12
endocrine pancreas
12
excitatory neuron
12
fibroblast of cardiac tissue
12
foreskin keratinocyte
12
mammary gland epithelial cell
12
putamen
12
skeletal muscle satellite cell
12
testis
11
Ammon's horn
11
aorta
11
erythroblast
11
fibroblast of dermis
11
layer of hippocampus
11
left cardiac atrium
11
skeletal muscle myoblast
10
Peyer's patch
10
chorion membrane
10
naive thymus-derived CD4-positive, alpha-beta T cell
10
osteoblast
10
pancreatic stellate cell
10
skeletal muscle tissue
10
temporal lobe
10
upper lobe of left lung
9
kidney tubule cell
9
memory B cell
9
naive T cell
9
naive thymus-derived CD8-positive, alpha-beta T cell
9
neurosphere
9
skeletal muscle fiber
9
skin fibroblast
8
angular gyrus
8
breast epithelium
8
epithelial cell of proximal tubule
8
esophagus
8
esophagus muscularis mucosa
8
glomerular endothelial cell
8
glutamatergic neuron
8
hepatic stellate cell
8
left renal cortex interstitium
8
left renal pelvis
8
right renal cortex interstitium
8
thoracic aorta
8
trophoblast
7
CD4-positive, alpha-beta T cell
7
bronchial epithelial cell
7
cingulate gyrus
7
colonic mucosa
7
duodenal mucosa
7
endothelial cell of lymphatic vessel
7
epithelial cell of prostate
7
esophagus squamous epithelium
7
eye
7
foreskin fibroblast
7
kidney glomerular epithelial cell
7
limb
7
luminal epithelial cell of mammary gland
7
mast cell
7
mature neutrophil
7
mucosa of rectum
7
occipital lobe
7
prostate gland
7
right cardiac atrium
7
right lobe of liver
7
right renal pelvis
7
stomach smooth muscle
7
tongue
7
type I muscle cell
7
type II muscle cell
6
Brodmann (1909) area 46
6
adipocyte
6
alternatively activated macrophage
6
amygdala
6
anterior cingulate cortex
6
cerebellum (Hemisphere)
6
choroid plexus epithelial cell
6
colon epithelial cell
6
cortical cell of adrenal gland
6
dermis blood vessel endothelial cell
6
dermis lymphatic vessel endothelial cell
6
enterocyte
6
fibroblast of breast
6
globus pallidus
6
glomerular visceral epithelial cell
6
hypothalamus
6
kidney epithelial cell
6
lower leg skin
6
medulla oblongata
6
mesenchymal stem cell
6
midbrain
6
muscle layer of colon
6
muscle layer of duodenum
6
myoepithelial cell of mammary gland
6
naive B cell
6
nucleus accumbens
6
olfactory receptor cell
6
pancreatic polypeptide-secreting cell
6
parathyroid adenoma
6
pons
6
renal cortical epithelial cell
6
retinal pigment epithelial cell
6
skin of body
6
superior temporal gyrus
6
vagina
5
cardiac fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
C1 segment of cervical spinal cord
5
CD14-positive, CD16-negative classical monocyte
5
CD4-positive helper T cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
Organ
2
kidney
Date released
February, 2021
1
January, 2022
1
June, 2020
Software used
1
macs
1
qTLtools
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
month_released!
February, 2021
organ_slims!
urinary bladder
Showing 2 of 2 results
table-tab-icon
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Download
FileSet
DSR649TZT
released
Annotation file set
: kidney cortex eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR994XVO
released
Annotation file set
: Accessible chromatin annotation for Kidney Kidney Cortex from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP