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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
1
binding sites
1
eQTL
1
histone modifications
Annotation Category
3
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
2
ChIP-seq
1
DNase-seq
1
RNA-seq
Available data
3
bed bed3+
File set status
4
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
81
kidney
42
right kidney
40
renal cortex interstitium
40
renal pelvis
36
left kidney
34
spleen
12
left renal cortex interstitium
12
left renal pelvis
12
right renal pelvis
11
right renal cortex interstitium
4
cortex of kidney
2
kidney epithelium
1
left kidney
1
glomerular epithelium
1
kidney - cortex
1
kidney - medulla
1
metanephros
1
nephron tubule
1
renal connecting tubule
1
renal cortex tubule
1
renal glomerulus
Organ
4
kidney
0
spleen
Date released
2
February, 2021
1
January, 2022
1
June, 2020
Software used
3
macs
1
qTLtools
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
organ_slims!
esophagus
Showing 4 of 4 results
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FileSet
DSR649TZT
released
Annotation file set
: kidney cortex eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR161OEG
released
Annotation file set
: Histone modifications annotation for Kidney Kidney_Cortex from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR182HKE
released
Annotation file set
: Binding sites annotation for Kidney Kidney_Cortex from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR994XVO
released
Annotation file set
: Accessible chromatin annotation for Kidney Kidney Cortex from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP