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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
binding sites
1
chromatin state
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
5
ChIP-seq
3
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
4
in vitro differentiated cells
1
cell line
Biosample term
54
H1-hESC
41
K562
23
trophoblast cell
16
GM12878
16
H9
16
chorionic villus
11
trophoblast
10
endodermal cell
8
GM06990
8
GM19240
8
HAP-1
8
HL-60
8
NAMALWA cell
8
OCI-LY7
8
mesodermal cell
7
CMK
7
GM12875
7
GM19238
7
GM19239
7
RPMI8226
6
GM12891
6
GM12892
6
H7-hESC
6
HUES6
6
HUES8
6
KBM-7
6
peripheral blood mononuclear cell
5
CyT49
5
H4
5
HUES64
5
NB4
5
ectodermal cell
4
ELF-1
4
GM12873
4
GM18505
4
GM19099
4
GM19193
4
HUES48
4
UCSF-4
4
embryonic facial prominence
3
ES-I3
3
GM10847
3
GM12872
3
GM18526
3
GM18951
3
cardiac mesoderm primordium
3
hESC H9
3
peripheral blood stem cell
3
primordial germ cell
2
NAMALWA
2
blood
2
first pancreatic bud
1
GM12874
1
H1
1
H7
1
Karpas-422
1
cardiogenic mesoderm
1
embryonic fibroblast
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
morula
1
placental hematopoietic stem cell
1
trophoblast giant cell
1
whole blood
Organ
5
embryo
0
blood
Life stage
4
embryonic
Date released
3
September, 2022
2
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
1
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
organ_slims!
lymphoid tissue
pituitary gland
Showing 5 of 5 results
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Download
FileSet
DSR271EXL
released
Annotation file set
: Candidate regulatory elements for BSS00273 ectodermal cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR203UHP
released
Annotation file set
: Target gene predictions for BSS00273 ectodermal cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR957XUP
released
Annotation file set
: Chromatin states for BSS00273 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR982BXE
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE ectodermal cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR729IJS
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell hESC_derived_ectodermal_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP