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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
23
trophoblast cell
22
foreskin keratinocyte
17
keratinocyte
16
chorionic villus
16
foreskin fibroblast
12
fibroblast of dermis
11
trophoblast
10
dermis blood vessel endothelial cell
10
lower leg skin
10
skin fibroblast
8
endodermal cell
7
mesodermal cell
6
dermis lymphatic vessel endothelial cell
6
skin of body
4
dermis microvascular lymphatic vessel endothelial cell
4
ectodermal cell
4
embryonic facial prominence
3
cardiac mesoderm primordium
3
epidermal melanocyte
3
iPS DF 4.7 Cell Line
3
suprapubic skin
2
basal cell of epidermis
2
first pancreatic bud
2
granular cell of epidermis
2
primordial germ cell
2
skin of forearm
2
skin of prepuce of penis
1
H1-hESC
1
cardiogenic mesoderm
1
embryonic fibroblast
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
morula
1
placental hematopoietic stem cell
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
1
trophoblast giant cell
Organ
4
embryo
0
lymph node
0
skin of body
Life stage
3
embryonic
Date released
3
September, 2022
1
June, 2020
Software used
2
r
1
chromhmm
1
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_type!
cell line
Showing 4 of 4 results
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Download
FileSet
DSR637SVM
released
Annotation file set
: Candidate regulatory elements for BSS00279 embryonic facial prominence from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR688JVK
released
Annotation file set
: Target gene predictions for BSS00279 embryonic facial prominence from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR594OZX
released
Annotation file set
: Chromatin states for BSS00279 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR964QFU
released
Annotation file set
: Accessible chromatin annotation for Others Embryonic facial prominences from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP