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Schema
Citing CMDGA
Clear Filters
Annotation type
3
binding sites
2
histone modifications
1
accessible chromatin
Annotation Category
6
cis-regulatory elements
Annotation type Category
5
ChIP-seq
1
ATAC-seq
Available data
5
bed bed3+
File set status
6
released
Genome assembly (visualization)
5
hg19
Organism
6
Homo sapiens
Biosample type
3
cell line
3
in vitro differentiated cells
Biosample term
87
heart
83
stomach
74
kidney
72
brain
67
muscle of arm
66
lung
63
HeLa-S3
61
A549
61
small intestine
59
placenta
58
adrenal gland
57
muscle of leg
55
large intestine
54
muscle of back
53
common myeloid progenitor, CD34-positive
52
left lung
46
thymus
45
H1-hESC
45
liver
45
right lung
43
neural progenitor cell
42
hematopoietic multipotent progenitor cell
42
right kidney
41
B cell
40
K562
40
renal cortex interstitium
40
renal pelvis
38
retina
36
left kidney
34
spinal cord
32
CD4-positive, alpha-beta memory T cell
32
endothelial cell
32
fibroblast
32
heart left ventricle
31
islet of Langerhans
30
spleen
29
macrophage
27
adipose tissue
27
hepatocyte
25
MCF-7
24
smooth muscle cell
22
CD8-positive, alpha-beta memory T cell
22
T cell
22
foreskin keratinocyte
22
pericyte cell
21
adipocyte
21
regulatory T cell
21
sigmoid colon
20
breast cancer cell
20
keratinocyte
20
mononuclear cell
20
natural killer cell
20
pigmented layer of retina
20
trophoblast cell
19
pancreas
19
tibial nerve
18
HFFc6
18
endothelial cell of umbilical vein
18
foreskin fibroblast
18
psoas muscle
17
body of pancreas
17
gastrocnemius medialis
17
heart right ventricle
17
ovary
17
thyroid gland
17
transverse colon
16
CD14-positive monocyte
16
CD8-positive, alpha-beta T cell
16
HepG2
16
cardiac muscle cell
16
caudate nucleus
16
chorionic villus
16
fibroblast of cardiac tissue
16
layer of hippocampus
16
mesenchymal stem cell
16
muscle of trunk
16
retinal pigment epithelial cell
16
testis
16
upper lobe of left lung
15
CD4-positive, alpha-beta T cell
15
GM12878
15
T-helper 1 cell
15
fibroblast of lung
15
mammary gland epithelial cell
15
skeletal muscle myoblast
15
skeletal muscle tissue
14
H9
14
T-helper 17 cell
14
T-helper 2 cell
14
astrocyte
14
coronary artery
14
endocrine pancreas
14
pancreatic ductal cell
14
prostate gland
13
Peyer's patch
13
bronchial epithelial cell
13
neurosphere
13
osteoblast
13
pancreatic beta cell
13
right atrium auricular region
13
skeletal muscle satellite cell
13
tibial artery
12
excitatory neuron
12
left renal cortex interstitium
12
lymphoblastoid cell line
12
monocyte
12
neuroblastoma cell
11
aorta
11
endothelial cell of hepatic sinusoid
11
fibroblast of dermis
11
left renal pelvis
11
mammary epithelial cell
11
pancreatic acinar cell
11
pancreatic alpha cell
11
pancreatic delta cell
11
right renal pelvis
11
substantia nigra
11
temporal lobe
10
22Rv1
10
Rhabdomyosarcoma
10
breast epithelium
10
choroid plexus epithelial cell
10
epithelial cell of prostate
10
esophagus muscularis mucosa
10
esophagus squamous epithelium
10
gastric cancer cell
10
kidney tubule cell
left cardiac atrium
10
lymphocyte
10
neutrophil
10
right renal cortex interstitium
10
skin fibroblast
10
subcutaneous adipose tissue
10
thoracic aorta
9
SK-N-DZ
9
colonic mucosa
9
diffuse intrinsic pontine glioma
9
erythroblast
9
hepatic stellate cell
9
liposarcoma
9
neuronal stem cell
9
omental fat pad
9
parathyroid adenoma
9
putamen
9
tongue
9
trophoblast
8
GM12865
8
HEK293
8
NAMALWA cell
8
ascending aorta
8
cerebellum
8
cingulate gyrus
8
colon epithelial cell
8
dermis blood vessel endothelial cell
8
duodenal mucosa
8
endodermal cell
8
frontal cortex
8
globus pallidus
8
immortal human breast epithelial cell line cell
8
limb
8
lower leg skin
8
myoepithelial cell of mammary gland
8
naive T cell
8
skeletal muscle fiber
8
vagina
7
AG04449 cell
7
AG04450 cell
7
AG09309 cell
7
AG09319 cell
7
AG10803 cell
7
B-lymphoblastoid cell line
7
BE(2)-C
7
BJ cell
7
CD1c-positive myeloid dendritic cell
7
CMK
7
Caco-2 cell
7
GM06990
7
GM12864
7
HT-29
7
IMR-90
7
SK-N-MC
7
SK-N-SH
7
T47D
7
WERI-Rb-1
7
angular gyrus
7
chorion membrane
7
dermis lymphatic vessel endothelial cell
7
endometrium adenocarcinoma
7
esophageal adenocarcinoma
7
esophagus
7
eye
7
fibroblast cell line
7
fibroblast of pulmonary artery
7
foreskin melanocyte
7
glomerular endothelial cell
7
kidney glomerular epithelial cell
7
mature neutrophil
7
renal cortical epithelial cell
7
stomach smooth muscle
6
Ammon's horn
Date released
May, 2021
5
February, 2021
1
November, 2022
Software used
6
macs
nospecificsoft_customcode
Lab
5
AMP-T2D consortium
1
Struan F.A. Grant, CHOP
Project
6
AMP
RFA
5
AMP
1
AMP2
biosample_term_name!
left cardiac atrium
files.file_type!
tsv
month_released!
May, 2021
software_used.software.name!
nospecificsoft_customcode
Showing 6 of 6 results
table-tab-icon
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Download
FileSet
DSR455VRI
released
Annotation file set
: Accessible chromatin of an established embryonic stem cell derived hypothalamic-like neuron model across three stages of in vitro differentiation (Embryonic Stem Cell).
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR927IPU
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell Expanded_potential_stem_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR134CON
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell Embryonic_Stem_Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR161DPJ
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell KhES-3 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR084KAX
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell hESC_VAL-3 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR026FET
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell Embryonic_Stem_Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP