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Citing CMDGA
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Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
pCHi-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
in vitro differentiated cells
Biosample term
58
HeLa-S3
46
heart
42
H1-hESC
41
stomach
40
kidney
38
A549
35
brain
34
muscle of arm
33
lung
32
neural progenitor cell
32
small intestine
31
K562
31
endothelial cell
30
adrenal gland
30
fibroblast
30
retina
29
B cell
29
placenta
28
muscle of leg
27
large intestine
26
common myeloid progenitor, CD34-positive
26
left lung
26
muscle of back
25
thymus
23
macrophage
23
pericyte cell
23
right lung
23
smooth muscle cell
22
liver
21
hematopoietic multipotent progenitor cell
21
renal pelvis
21
right kidney
20
pigmented layer of retina
20
renal cortex interstitium
19
HFFc6
19
hepatocyte
18
CD4-positive, alpha-beta memory T cell
18
left kidney
17
T cell
17
adipocyte
17
adipose tissue
17
heart left ventricle
17
spinal cord
14
CD8-positive, alpha-beta memory T cell
14
islet of Langerhans
14
natural killer cell
14
spleen
13
excitatory neuron
13
pancreas
12
MCF-7
12
astrocyte
12
endothelial cell of hepatic sinusoid
12
mononuclear cell
12
retinal pigment epithelial cell
12
sigmoid colon
11
GM12878
11
HepG2
11
fibroblast of cardiac tissue
11
pancreatic beta cell
11
regulatory T cell
11
trophoblast cell
10
coronary artery
10
heart right ventricle
10
keratinocyte
10
mammary gland epithelial cell
10
mesenchymal stem cell
10
ovary
10
pancreatic delta cell
10
pancreatic ductal cell
10
psoas muscle
10
tibial nerve
9
T-helper 1 cell
9
body of pancreas
9
caudate nucleus
9
endothelial cell of umbilical vein
9
fibroblast of lung
9
foreskin keratinocyte
9
gastrocnemius medialis
9
left cardiac atrium
9
pancreatic acinar cell
9
pancreatic alpha cell
9
right atrium auricular region
9
thyroid gland
9
tibial artery
9
transverse colon
8
CD14-positive monocyte
8
CD8-positive, alpha-beta T cell
8
H9
8
T-helper 17 cell
8
T-helper 2 cell
8
chorionic villus
8
colon epithelial cell
8
endocrine pancreas
8
erythroblast
8
glutamatergic neuron
8
lymphocyte
8
muscle of trunk
8
skeletal muscle satellite cell
8
skin fibroblast
7
Peyer's patch
7
cardiac muscle cell
7
chorion membrane
7
endothelial cell of lymphatic vessel
7
fibroblast of dermis
7
foreskin fibroblast
7
frontal cortex
7
layer of hippocampus
7
monocyte
7
osteoblast
7
skeletal muscle myoblast
6
SGBS preadipocytes
6
aorta
6
ascending aorta
6
choroid plexus epithelial cell
6
cortical cell of adrenal gland
6
endometrium adenocarcinoma
6
enterocyte
6
glomerular visceral epithelial cell
6
hepatic stellate cell
6
immortal human breast epithelial cell line cell
6
kidney tubule cell
6
left renal pelvis
6
luminal epithelial cell of mammary gland
6
mast cell
6
memory B cell
6
naive T cell
6
neurosphere
6
olfactory receptor cell
6
right renal pelvis
6
skeletal muscle fiber
6
trophoblast
6
type I muscle cell
6
upper lobe of left lung
5
cardiac fibroblast
5
Ammon's horn
5
GM19240
5
HUES8
5
NAMALWA cell
5
SK-N-DZ
5
SK-N-SH
5
basal cell
5
breast epithelium
5
bronchial epithelial cell
5
cerebellum
5
chondrocyte
5
cingulate gyrus
5
colonic mucosa
5
duodenal mucosa
5
endocardial cell
5
epithelial cell of prostate
5
epithelial cell of proximal tubule
5
esophagus
5
esophagus muscularis mucosa
5
esophagus squamous epithelium
5
eye
5
gabaergic neuron
5
inhibitory neuron
5
left renal cortex interstitium
5
limb
5
mucosa of rectum
5
myofibroblast cell
5
naive B cell
5
naive thymus-derived CD8-positive, alpha-beta T cell
5
neutrophil
5
occipital lobe
5
omental fat pad
5
right renal cortex interstitium
5
testis
5
type II muscle cell
4
22Rv1
4
AG04449 cell
4
AG04450 cell
4
AG09309 cell
4
AG09319 cell
4
AG10803 cell
4
BE(2)-C
4
BJ cell
4
Brodmann (1909) area 46
4
CD4-positive helper T cell
4
CD4-positive, alpha-beta T cell
4
Caco-2 cell
4
CyT49
4
GM06990
4
GM12864
4
GM12865
4
GM18507
4
GM19238
4
GM19239
4
HCT116
4
HEK293
4
HL-60
4
IMR-90
4
LNCaP clone FGC
4
NT2-D1 cell
4
Pancreatic progenitors (progenitor cell of endocrine pancreas)
4
SK-N-MC
4
T47D
4
WERI-Rb-1
4
angular gyrus
4
astrocyte of the cerebellum
Date released
February, 2021
May, 2021
1
March, 2020
Software used
1
nospecificsoft_customcode
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
month_released!
February, 2021
May, 2021
Showing 1 of 1 results
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Download
FileSet
DSR929DUM
released
Annotation file set
: A target gene prediction annotation in Human Human ES Cells of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP